RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 TTLQ8NG68 377 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 HASPINQ8TF76 798 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PANX1Q96RD7 426 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 ZIC5Q96T25 663 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 CLEC4MQ9H2X3 399 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 NYNRINQ9P2P1 1898 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 LCTP09848 1927 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PRAMEF33A0A0G2JMD5 474 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 UPK3BL1B0FP48 263 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 UPK3BL2E5RIL1 263 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 CA12O43570 354 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PRAMEF10O60809 474 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 NBNO60934 754 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 CPSF4O95639 269 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PEX11BO96011 259 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 SEMG1P04279 462 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 NUDT7P0C024 238 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PTPN6P29350 595 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 HOXA11P31270 313 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 CDC42P60953 191 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 RAB14P61106 215 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 SPIBQ01892 262 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 METTL2BQ6P1Q9 378 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PAQR6Q6TCH4 344 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 PDZD3Q86UT5 571 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 LGI4Q8N135 537 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 LRRC17Q8N6Y2 441 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 TMEM145Q8NBT3 493 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 OR11H4Q8NGC9 324 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 OR4K2Q8NGD2 314 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 POP5Q969H6 163 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 MAL2Q969L2 176 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 C7orf34Q96L11 122 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 TEPSINQ96N21 525 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 EGFL8Q99944 293 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 APOL5Q9BWW9 433 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 MED28Q9H204 178 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 B3GAT2Q9NPZ5 323 aa11.9□□□□□ -0.5
SCAMP2-204ENST00000563829 E9PQ18 207 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 LRRTM2O43300 516 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ATG13O75143 517 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CSO75390 466 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ZXDBP98169 803 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 GRM7Q14831 915 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 PTGES3Q15185 160 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SLC27A1Q6PCB7 646 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 TMIGD1Q6UXZ0 262 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 TRIM69Q86WT6 500 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.89□□□□□ -0.513e-17■■■□□ 19.1
SCAMP2-204ENST00000563829 RBPMSQ93062 196 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 RTP3Q9BQQ7 232 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ANKRA2Q9H9E1 313 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CLN6Q9NWW5 311 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 DIMT1Q9UNQ2 313 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 GTPBP1O00178 669 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SEC14L5O43304 696 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SUV39H1O43463 412 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 GLUD1P00367 558 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF286BP0CG31 522 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 PKMP14618 531 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 LHCGRP22888 699 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 RIN1Q13671 783 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CPSF6Q16630 551 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CNIH2Q6PI25 160 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 LINC00518Q8N0U6 118 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CHST13Q8NET6 341 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF304Q9HCX3 659 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 TXNL4BQ9NX01 149 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 TNFRSF10DQ9UBN6 386 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 A0A0A6YYJ9 748 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 RPS10-NUDT3A0A1W2PQS6 291 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 HYKKA2RU49 373 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SLC43A1O75387 559 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 PRAMEF1O95521 474 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 EDNRBP24530 442 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 SMSP52788 366 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 CASP9P55211 416 aa11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 RPL6Q02878 288 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-204ENST00000563829 KCNC3Q14003 757 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms