RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SLC26A11Q86WA9 606 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 CCDC170Q8IYT3 715 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 EID3Q8N140 333 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 FBXO15Q8NCQ5 510 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 OR5M9Q8NGP3 310 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 PEX13Q92968 403 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 RERGQ96A58 199 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 PANX3Q96QZ0 392 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 TSSK1BQ9BXA7 367 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 SPNS1Q9H2V7 528 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 NECTIN3Q9NQS3 549 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 KLF13Q9Y2Y9 288 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 NAALAD2Q9Y3Q0 740 aa9.66□□□□□ -0.86
SF3B3-204ENST00000563739 RAI1Q7Z5J4 1906 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-204ENST00000563739 FREM3P0C091 2139 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 GRID2IPA4D2P6 1211 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 A6NNC1 897 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 FAM166BA8MTA8 275 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 NPIPA2E9PIF3 369 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 NPIPA3F8WFD2 350 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 CDK2AP1O14519 115 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 KIF5CO60282 957 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 IGHG3P01860 377 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 HEXAP06865 529 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 PKMP14618 531 aaKnown RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 CYLC1P35663 651 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 MAGEA1P43355 309 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 TTPAP49638 278 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 PRAMEP78395 509 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 ABATP80404 500 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 MPP1Q00013 466 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 NDUFA9Q16795 377 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 GXYLT1Q4G148 440 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 ARHGAP11AQ6P4F7 1023 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 ZNF549Q6P9A3 640 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 TTC23LQ6PF05 361 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 ARSKQ6UWY0 536 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 CENPUQ71F23 418 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 LRRC6Q86X45 466 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 TMEM139Q8IV31 216 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 REXO1L1PQ8IX06 675 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 CIARTQ8N365 385 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 HORMAD2Q8N7B1 307 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 NAXEQ8NCW5 288 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 SKA2Q8WVK7 121 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 RMND5BQ96G75 393 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 C18orf12Q96KH6 178 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 OR1F2PQ96R84 312 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 BAG1Q99933 345 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-204ENST00000563739 DEFB127Q9H1M4 99 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 PLEKHF2Q9H8W4 249 aa9.65□□□□□ -0.86
SF3B3-204ENST00000563739 A0A1B0GVC2 190 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 GOLGA8KD6RF30 607 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 GOLGA8TH3BQL2 631 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 GFYI3L273 518 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 TXNDC9O14530 226 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 GALR3O60755 368 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CCNDBP1O95273 360 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 FHP07954 510 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 INHBBP09529 407 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 MAOAP21397 527 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ACVR2AP27037 513 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 PPP2R1BP30154 601 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 FMO4P31512 558 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 TAS2R50P59544 299 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 TBPL1P62380 186 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 FOXO1Q12778 655 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 HYAL2Q12891 473 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CUL1Q13616 776 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 TSTA3Q13630 321 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 RPS6KA1Q15418 735 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 DEFB113Q30KQ7 82 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 AARS2Q5JTZ9 985 aaKnown RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CES3Q6UWW8 571 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 MBOAT1Q6ZNC8 495 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 QSOX2Q6ZRP7 698 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 KIAA0408Q6ZU52 694 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CXXC5Q7LFL8 322 aaKnown RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ADCK2Q7Z695 626 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 LINC00523Q86TU6 105 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CXorf67Q86X51 503 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CYP4Z2PQ8N1L4 340 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 MPP5Q8N3R9 675 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 RAB42Q8N4Z0 105 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ZNF740Q8NDX6 193 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 OR5M3Q8NGP4 307 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ASB11Q8WXH4 323 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 MFSD3Q96ES6 412 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 COX4I2Q96KJ9 171 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ALS2CR12Q96Q35 445 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 CNPPD1Q9BV87 410 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 ABCF3Q9NUQ8 709 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 SPRR3Q9UBC9 169 aa9.64□□□□□ -0.87
SF3B3-204ENST00000563739 PACSIN2Q9UNF0 486 aaPredicted RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 PPIEQ9UNP9 301 aaKnown RBP9.64□□□□□ -0.87
SF3B3-204ENST00000563739 SLC22A7Q9Y694 548 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms