RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ANAPC2Q9UJX6 822 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 R3HDM2Q9Y2K5 976 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 PTRH2Q9Y3E5 179 aaKnown RBP4.6□□□□□ -1.67
LINC00254-201ENST00000563416 HES2Q9Y543 173 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 ATP6V1DQ9Y5K8 247 aa4.6□□□□□ -1.67
LINC00254-201ENST00000563416 ZCWPW2A0A1B0GU75 182 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TRBC2A0A5B9 178 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 OR2A25A4D2G3 310 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 ARL5CA6NH57 179 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 PTGESO14684 152 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 HS6ST1O60243 411 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 FAM189A1O60320 539 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TOM1L1O75674 476 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 DDHD2O94830 711 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 SRPRAP08240 638 aaKnown RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MCF2P10911 925 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 PFKFB1P16118 471 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 GAP43P17677 238 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CPT2P23786 658 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CMA1P23946 247 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 DNAJB1P25685 340 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 PSMA3P25788 255 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 PCGF3Q3KNV8 242 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 ZSCAN23Q3MJ62 389 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 XKR4Q5GH76 650 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 SIRPB2Q5JXA9 342 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CCNYL2Q5T2Q4 361 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 SLC39A4Q6P5W5 647 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 FAM171BQ6P995 826 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF852Q6ZMS4 543 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MEX3BQ6ZN04 569 aaKnown RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 SDCCAG8Q86SQ7 713 aaPredicted RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 KBTBD6Q86V97 674 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CCDC170Q8IYT3 715 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CARNMT1Q8N4J0 409 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TMCO5AQ8N6Q1 288 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 IQUBQ8NA54 791 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 SLC24A4Q8NFF2 622 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 HM13Q8TCT9 377 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 URGCPQ8TCY9 931 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MRPS27Q92552 414 aaKnown RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 CFAP57Q96MR6 1250 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 ZNF558Q96NG5 402 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 DGAT2Q96PD7 388 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 FNBP1Q96RU3 617 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 GAD1Q99259 594 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TMEM175Q9BSA9 504 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 C1QTNF1Q9BXJ1 281 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TRIM9Q9C026 710 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 DNAI2Q9GZS0 605 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 LRMDAQ9H2I8 198 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 OSGEPL1Q9H4B0 414 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MARCH5Q9NX47 278 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MIOSQ9NXC5 875 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 DNAJB4Q9UDY4 337 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 NENFQ9UMX5 172 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 FAF1Q9UNN5 650 aaPredicted RBP4.59□□□□□ -1.67
LINC00254-201ENST00000563416 STYXL1Q9Y6J8 313 aa4.59□□□□□ -1.67
LINC00254-201ENST00000563416 MIA3Q5JRA6 1907 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 UBE4BO95155 1302 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TCRBV21S2A2A0A5A6 115 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ANKRD66B4E2M5 251 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 MAP2K7O14733 419 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 POLR2DO15514 142 aaKnown RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SOCS5O75159 536 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 GPC4O75487 556 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SLC22A3O75751 556 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 HIST1H2ABP04908 130 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TUBBP07437 444 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 STMN1P16949 149 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 HIST1H2ADP20671 130 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 NR2F2P24468 414 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 NMT1P30419 496 aaKnown RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 AHRP35869 848 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ATP6V1E1P36543 226 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 HNF4AP41235 474 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SLC11A1P49279 550 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 PNLIPRP2P54317 469 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 GALCP54803 685 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 MLLT10P55197 1068 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 COG7P83436 770 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 CAMK2DQ13557 499 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ALCAMQ13740 583 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 KCNC3Q14003 757 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SMC1AQ14683 1233 aaKnown RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TTC31Q49AM3 519 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ZC2HC1CQ53FD0 456 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 SPOUT1Q5T280 376 aaKnown RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 STXBP5Q5T5C0 1151 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 CST9LP1Q5W188 147 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ACSM2BQ68CK6 577 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 KIAA0930Q6ICG6 404 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ALKAL1Q6UXT8 129 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 GSG1LQ6UXU4 331 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 HIST3H2AQ7L7L0 130 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF720Q7Z2F6 126 aa4.58□□□□□ -1.68
LINC00254-201ENST00000563416 TMEM173Q86WV6 379 aaPredicted RBP4.58□□□□□ -1.68
LINC00254-201ENST00000563416 EMC1Q8N766 993 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms