RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DAG1Q14118 895 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 TMEM179BQ7Z7N9 219 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 SYNPOQ8N3V7 929 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 PPCDCQ96CD2 204 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 C1QTNF7Q9BXJ2 289 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 MS4A8Q9BY19 250 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 FBRSQ9HAH7 460 aa18.3■□□□□ 0.52
SMPD3-203ENST00000563226 SCHIP1Q9P0W5 487 aaPredicted RBP18.3■□□□□ 0.52
SMPD3-203ENST00000563226 PDZK1P1A8MUH7 402 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 H0Y8X5 98 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 H3BNH8 94 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 CACNB4O00305 520 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 OR6B1O95007 311 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 H6PDO95479 791 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 ALPLP05186 524 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 CAPGP40121 348 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 TFF2Q03403 129 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 VAC14Q08AM6 782 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 ZIK1Q3SY52 487 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 TPRG1LQ5T0D9 272 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 KHDRBS2Q5VWX1 349 aaKnown RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 FAM180BQ6P0A1 224 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 TMEM92Q6UXU6 159 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 ADGRF3Q8IZF5 1079 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 DHRSXQ8N5I4 330 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 MAL2Q969L2 176 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 MRGPRX1Q96LB2 322 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 GRIP2Q9C0E4 1043 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 RMI1Q9H9A7 625 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 GPATCH2Q9NW75 528 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 SPASTQ9UBP0 616 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 ACSL6Q9UKU0 697 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 VPS4AQ9UN37 437 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 LCMT2O60294 686 aaKnown RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 IL1RNP18510 177 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 PKLRP30613 574 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 RAB28P51157 221 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 ALDH3A2P51648 485 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 CLCN2P51788 898 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 MVDP53602 400 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 SPIDRQ14159 915 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 RGNQ15493 299 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 COX20Q5RI15 118 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 DEPDC1Q5TB30 811 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 KIAA1324Q6UXG2 1013 aaKnown RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 PDXPQ96GD0 296 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
SMPD3-203ENST00000563226 PCBD2Q9H0N5 130 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 SMURF2Q9HAU4 748 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 VNN3Q9NY84 501 aa18.29■□□□□ 0.52
SMPD3-203ENST00000563226 G3V2T6 193 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 H3BQ06 376 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 PABPC4LP0CB38 370 aaKnown RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ACSL1P33121 698 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 KDELR2P33947 212 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 CSNK1G2P78368 415 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ADARB1P78563 741 aaKnown RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ERICH5Q6P6B1 374 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 VTCN1Q7Z7D3 282 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 NAGSQ8N159 534 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ZCCHC7Q8N3Z6 543 aaKnown RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 OR52E1Q8NGJ3 308 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 OR2A1Q8NGT9 310 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 GOT1L1Q8NHS2 421 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 JPH3Q8WXH2 748 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 RMND5BQ96G75 393 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 LHX9Q9NQ69 397 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ATAD3AQ9NVI7 634 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ZNF282Q9UDV7 671 aaPredicted RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 SAMD4AQ9UPU9 718 aaKnown RBP18.28■□□□□ 0.52
SMPD3-203ENST00000563226 ICKQ9UPZ9 632 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
SMPD3-203ENST00000563226 PRSS38A1L453 326 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 C2CD4DB7Z1M9 353 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 GNGT2O14610 69 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 OR1F1O43749 312 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 GPR37L1O60883 481 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 SEC24DO94855 1032 aaPredicted RBP18.27■□□□□ 0.52
SMPD3-203ENST00000563226 NDUFV2P19404 249 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 BSGP35613 385 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 MAGEA2P43356 314 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 RPL5P46777 297 aaKnown RBP18.27■□□□□ 0.52
SMPD3-203ENST00000563226 CRYBA2P53672 197 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 GRSF1Q12849 480 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD3-203ENST00000563226 CCNYL2Q5T2Q4 361 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 R3HCC1LQ7Z5L2 792 aaKnown RBP18.27■□□□□ 0.52
SMPD3-203ENST00000563226 ADCK2Q7Z695 626 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 ZDHHC13Q8IUH4 622 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 EID3Q8N140 333 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 PGBD3Q8N328 593 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 RPLP0P6Q8NHW5 317 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 OR1E3Q8WZA6 343 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 SCARF2Q96GP6 870 aaPredicted RBP18.27■□□□□ 0.52
SMPD3-203ENST00000563226 NECTIN4Q96NY8 510 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 TRIM4Q9C037 500 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 TAAR2Q9P1P5 351 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 RAPGEFL1Q9UHV5 662 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 ABCG2Q9UNQ0 655 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms