RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 FAR2Q96K12 515 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 SERPINI1Q99574 410 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 DPH2Q9BQC3 489 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 REXO4Q9GZR2 422 aaKnown RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 CCDC86Q9H6F5 360 aaKnown RBP17.9■□□□□ 0.46
RAB40C-207ENST00000563109 THAP1Q9NVV9 213 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 PPT2Q9UMR5 302 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 TIMM22Q9Y584 194 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 SLC22A7Q9Y694 548 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
RAB40C-207ENST00000563109 SDK2Q58EX2 2172 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 LRIT2A6NDA9 550 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 KLF11O14901 512 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ERI3O43414 337 aaKnown RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 RAD1O60671 282 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 TGFB1P01137 390 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 PDYNP01213 254 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF888P0CJ79 500 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 PIM1P11309 404 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 HSD3B1P14060 373 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ALOX12P18054 663 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 PTX3P26022 381 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 HSD3B2P26439 372 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 HNRNPH1P31943 449 aaKnown RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 RORAP35398 523 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 NEK2P51955 445 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 FOXA1P55317 472 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 PCBP4P57723 403 aaKnown RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ABHD18Q0P651 414 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 HYAL2Q12891 473 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 CSTF3Q12996 717 aaKnown RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 TCHHL1Q5QJ38 904 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 KHDRBS2Q5VWX1 349 aaKnown RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 KANK2Q63ZY3 851 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 CLEC6AQ6EIG7 209 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ZFAND4Q86XD8 727 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 DSELQ8IZU8 1212 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 OR2L5Q8NG80 312 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 FAM76AQ8TAV0 307 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 AGR3Q8TD06 166 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 GATA6Q92908 595 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 ILKAPQ9H0C8 392 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 COPS7BQ9H9Q2 264 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 BRF2Q9HAW0 419 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 NMRK1Q9NWW6 199 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 PSD3Q9NYI0 1048 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-207ENST00000563109 RAP2CQ9Y3L5 183 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 TRAF6Q9Y4K3 522 aa17.89■□□□□ 0.45
RAB40C-207ENST00000563109 CACNA1AO00555 2505 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 MEN1O00255 615 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ITM2AO43736 263 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 LIPCP11150 499 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 SPTBP11277 2137 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 IL1RNP18510 177 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ARRB2P32121 409 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 RAB8AP61006 207 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 DCDP81605 110 aaKnown RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 IMPG1Q17R60 797 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ADPRMQ3LIE5 342 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ARHGAP40Q5TG30 622 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 CES4AQ5XG92 561 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 CLYBLQ8N0X4 340 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 RNF175Q8N4F7 328 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ARHGEF39Q8N4T4 335 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 METTL27Q8N6F8 245 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 GBP7Q8N8V2 638 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 SLC38A9Q8NBW4 561 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 UTP15Q8TED0 518 aaKnown RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ZNF75CPQ92670 426 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 MR1Q95460 341 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 MS4A6EQ96DS6 147 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 MMABQ96EY8 250 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 GBP5Q96PP8 586 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 KCNC2Q96PR1 638 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 F2RL3Q96RI0 385 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 C17orf62Q9BQA9 187 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 ROGDIQ9GZN7 287 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 OR51B5Q9H339 312 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 KLHL31Q9H511 634 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 TNFRSF12AQ9NP84 129 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 FARSBQ9NSD9 589 aaKnown RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 SLC12A4Q9UP95 1085 aa17.88■□□□□ 0.45
RAB40C-207ENST00000563109 MRPS2Q9Y399 296 aaKnown RBP17.88■□□□□ 0.45
RAB40C-207ENST00000563109 A0A0A6YYC8 382 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 TEX51A0A1B0GUA7 166 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 C9J4A7 227 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 I3L1I5 382 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 SH3BGRLO75368 114 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 KLHL18O94889 574 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 MED26O95402 600 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 NSA2O95478 260 aaKnown RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 FGF4P08620 206 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 FBLP22087 321 aaKnown RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 HTR6P50406 440 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 PLA2G16P53816 162 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 CUL3Q13618 768 aa17.87■□□□□ 0.45
RAB40C-207ENST00000563109 COL9A2Q14055 689 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-207ENST00000563109 DEFB134Q4QY38 66 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms