RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 TPOP07202 933 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ALOX12P18054 663 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 CCR8P51685 355 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ITGA8P53708 1063 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 RGS1Q08116 209 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 RNFT1Q5M7Z0 435 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF468Q5VIY5 522 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ARHGAP11AQ6P4F7 1023 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF549Q6P9A3 640 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 PAOXQ6QHF9 649 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 AGTRAPQ6RW13 159 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 C3P1Q6ZMU1 363 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 PIWIL4Q7Z3Z4 852 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 FGD2Q7Z6J4 655 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 CD163Q86VB7 1156 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF227Q86WZ6 799 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 TMEM139Q8IV31 216 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 CPNE9Q8IYJ1 553 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ARMC2Q8NEN0 867 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 ABHD11Q8NFV4 315 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 RND1Q92730 232 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 DESI2Q9BSY9 194 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 PARVBQ9HBI1 364 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 XAB2Q9HCS7 855 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 KCNJ16Q9NPI9 418 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 PLSCR2Q9NRY7 297 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 KCNN3Q9UGI6 736 aa14.75□□□□□ -0.05
HERPUD1-205ENST00000562914 A0A1B0GTH9 108 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 FAM221AA4D161 298 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 SDR42E2A6NKP2 422 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 NDUFS4O43181 175 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 CHST10O43529 356 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 HIST1H2AGP0C0S8 130 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 NPPBP16860 134 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 TFEBP19484 476 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 HIST1H2ADP20671 130 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 PTGER1P34995 402 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 MEOX1P50221 254 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 CTBP1Q13363 440 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 TERF2Q15554 542 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 CES4AQ5XG92 561 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 ACAD11Q709F0 780 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 DENND6AQ8IWF6 608 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 DMRTC2Q8IXT2 367 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 ZFP62Q8NB50 900 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF740Q8NDX6 193 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 OR4K1Q8NGD4 311 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 GABPB2Q8TAK5 448 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF669Q96BR6 464 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 HIST1H2AHQ96KK5 128 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 PTCHD1Q96NR3 888 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 HIST1H2AJQ99878 128 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 H2AFJQ9BTM1 129 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 RBCK1Q9BYM8 510 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 DEFB126Q9BYW3 111 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 FBXO6Q9NRD1 293 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 TRMT6Q9UJA5 497 aaKnown RBP14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 PDE10AQ9Y233 779 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 GTF3C1Q12789 2109 aa14.74□□□□□ -0.05
HERPUD1-205ENST00000562914 ZCWPW2A0A1B0GU75 182 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 TCRBV7S3A2A0A539 114 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 TCRBV16S1A1N1A0A5B0 115 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 TRBC2A0A5B9 178 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 SYNDIG1LA6NDD5 238 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 PABPN1LA6NDY0 278 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF860A6NHJ4 632 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 CEP104O60308 925 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 AVILO75366 819 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 CDH1P12830 882 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 MSX1P28360 303 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 SLC1A2P43004 574 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 NAE1Q13564 534 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 BBS9Q3SYG4 887 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 DEFB134Q4QY38 66 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 KIAA0408Q6ZU52 694 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 CAND1Q86VP6 1230 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 SULF2Q8IWU5 870 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 SHISA5Q8N114 240 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 CYP4X1Q8N118 509 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 MYO1HQ8N1T3 1032 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 KIF2BQ8N4N8 673 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 OR5T3Q8NGG3 340 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 NT5CQ8TCD5 201 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 ZNF559Q9BR84 538 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 AARSD1Q9BTE6 412 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 PRDM9Q9NQV7 894 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 ZFP69BQ9UJL9 534 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 FBXO5Q9UKT4 447 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 GUCA1BQ9UMX6 200 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 RNF6Q9Y252 685 aa14.73□□□□□ -0.05
HERPUD1-205ENST00000562914 IGKV3D-11A0A0A0MRZ8 115 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 PSMD12O00232 456 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 OR1F1O43749 312 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 PEX1O43933 1283 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 B4GALT2O60909 372 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 FGGP02679 453 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 HOXD4P09016 255 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 AHRP35869 848 aa14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 ST13P50502 369 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-205ENST00000562914 CLCN2P51788 898 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms