RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 Q6ZPB1 254 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 NCCRP1Q6ZVX7 275 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 ABHD13Q7L211 337 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 LGI4Q8N135 537 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 EID3Q8N140 333 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 CHTF18Q8WVB6 975 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 SNF8Q96H20 258 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PTCHD1Q96NR3 888 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 TRIM54Q9BYV2 358 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 RHBGQ9H310 441 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 PPT2Q9UMR5 302 aa12.19□□□□□ -0.46
SF3B3-202ENST00000562722 TEP1Q99973 2627 aaKnown RBP12.19□□□□□ -0.46
SF3B3-202ENST00000562722 NME2P1O60361 137 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 PRMT3O60678 531 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 B3GALT4O96024 378 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF888P0CJ79 500 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 NME2P22392 152 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 MAGEA3P43357 314 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 RIPPLY3P57055 190 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 IL2P60568 153 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 CSHL1Q14406 222 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 CRYMQ14894 314 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 NIPAL1Q6NVV3 410 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 SIAH3Q8IW03 269 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 PPIL6Q8IXY8 311 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 AGGF1Q8N302 714 aaeCLIP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 AFAP1L2Q8N4X5 818 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 GPATCH11Q8N954 259 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 NAT8LQ8N9F0 302 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 C2CD4AQ8NCU7 369 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 ABHD11Q8NFV4 315 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 ELP5Q8TE02 316 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 SLC5A11Q8WWX8 675 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 MS4A14Q96JA4 679 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 SIGLEC10Q96LC7 697 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 TRIM51Q9BSJ1 452 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 PPANQ9NQ55 473 aaKnown RBP12.18□□□□□ -0.46
SF3B3-202ENST00000562722 APCP25054 2843 aa12.18□□□□□ -0.46
SF3B3-202ENST00000562722 TRBC2A0A5B9 178 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 A8MUA0 341 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 FCHO1O14526 889 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 TFECO14948 347 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-202ENST00000562722 DNAJB6O75190 326 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 GUCA1CO95843 209 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 MAOAP21397 527 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 KIR3DL1P43629 444 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 ITGA8P53708 1063 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 CDKN2DP55273 166 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 RAB8AP61006 207 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 BTG2P78543 158 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 TIAL1Q01085 375 aaKnown RBP eCLIP12.17□□□□□ -0.46
SF3B3-202ENST00000562722 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 CATSPEREQ5SY80 951 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 ZNF295-AS1Q8N0V1 137 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 ARMC2Q8NEN0 867 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 ATL1Q8WXF7 558 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 PBKQ96KB5 322 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 NAP1L3Q99457 506 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-202ENST00000562722 OLFM1Q99784 485 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 DEFB126Q9BYW3 111 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 COQ3Q9NZJ6 369 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 ZFP69BQ9UJL9 534 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 DYRK1BQ9Y463 629 aa12.17□□□□□ -0.46
SF3B3-202ENST00000562722 SCN2AQ99250 2005 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 SCN3AQ9NY46 2000 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 GOLGA6L10A0A0M3HER8 536 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 URADA6NGE7 173 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 SAGE2PA6NJ88 616 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 E9PLN8 166 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 PGRMC1O00264 195 aaKnown RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 CDC40O60508 579 aaKnown RBP eCLIP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 TTC4O95801 387 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 TPOP07202 933 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 PTGER1P34995 402 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 RFC3P40938 356 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 MEOX1P50221 254 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 HLCSP50747 726 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 AP1S2P56377 157 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 MLF1P58340 268 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 HYAL2Q12891 473 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 RBBP5Q15291 538 aaKnown RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 SPANXN3Q5MJ09 141 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 QSOX2Q6ZRP7 698 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 OR4K1Q8NGD4 311 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 OR56A3Q8NH54 315 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 NT5CQ8TCD5 201 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 UTP15Q8TED0 518 aaKnown RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 GRK7Q8WTQ7 553 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms