RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 TMEM35AQ53FP2 167 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 PRMT9Q6P2P2 845 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 C6orf15Q6UXA7 325 aaPredicted RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 ZNF517Q6ZMY9 492 aaPredicted RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 TTLL10Q6ZVT0 673 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CHSY3Q70JA7 882 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CUZD1Q86UP6 607 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 PROKR1Q8TCW9 393 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 FGF11Q92914 225 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CMTM7Q96FZ5 175 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 SMIM10Q96HG1 83 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 C10orf90Q96M02 699 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 MTERF1Q99551 399 aaKnown RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 TXLNGQ9NUQ3 528 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 INTS9Q9NV88 658 aaKnown RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 PADI1Q9ULC6 663 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 CDC14AQ9UNH5 594 aa12.13□□□□□ -0.47
CDH11-204ENST00000562712 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.13□□□□□ -0.47
CDH11-204ENST00000562712 PTPRQQ9UMZ3 2332 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 CACNA1GO43497 2377 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 A0A1B0GX78 115 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 MAGEB17A8MXT2 336 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 MANBAO00462 879 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 FFAR3O14843 346 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 GPR42O15529 346 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 CRCPO75575 148 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ONECUT2O95948 504 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 PDYNP01213 254 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 STATHP02808 62 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 AGXTP21549 392 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 HMOX2P30519 316 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 HNRNPH1P31943 449 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 ARRB2P32121 409 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 NEK2P51955 445 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ARFIP1P53367 373 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 CYP4F2P78329 520 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 CUL3Q13618 768 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 DEPDC1Q5TB30 811 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ATG16L1Q676U5 607 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ADNP2Q6IQ32 1131 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 NIPAL1Q6NVV3 410 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ATG14Q6ZNE5 492 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ABHD13Q7L211 337 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 DTX1Q86Y01 620 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 DSELQ8IZU8 1212 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 CLYBLQ8N0X4 340 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ESX1Q8N693 406 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ARFGAP2Q8N6H7 521 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 SRFBP1Q8NEF9 429 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 NLGN4YQ8NFZ3 816 aaPredicted RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 CCT6BQ92526 530 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 MTFMTQ96DP5 389 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 GBP5Q96PP8 586 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 MS4A8Q9BY19 250 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 C20orf27Q9GZN8 174 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 KLHL31Q9H511 634 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 BRF2Q9HAW0 419 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 DMRT3Q9NQL9 472 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
CDH11-204ENST00000562712 TRAF6Q9Y4K3 522 aa12.12□□□□□ -0.47
CDH11-204ENST00000562712 H0YIG0 161 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 AZIN1O14977 448 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 FOXS1O43638 330 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 ITM2AO43736 263 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 SNNO75324 88 aaPredicted RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 MED26O95402 600 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 HSPA4LO95757 839 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 TGFB1P01137 390 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 PIM1P11309 404 aaPredicted RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 HSD3B1P14060 373 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 ALOX12P18054 663 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 HSD3B2P26439 372 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 ATP1A2P50993 1020 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 FOXA1P55317 472 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 RPS13P62277 151 aaKnown RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 SKP1P63208 163 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 TGM3Q08188 693 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 BST1Q10588 318 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 DDX39BQ13838 428 aaKnown RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 TOR1AIP1Q5JTV8 583 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 KHDRBS2Q5VWX1 349 aaKnown RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
CDH11-204ENST00000562712 RNF165Q6ZSG1 346 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 TRIM46Q7Z4K8 759 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 KIRREL3Q8IZU9 778 aa12.11□□□□□ -0.47
CDH11-204ENST00000562712 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms