RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 IL2P60568 153 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 ART3Q13508 389 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HERC3Q15034 1050 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 C3AR1Q16581 482 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 MEP1AQ16819 746 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 BBS9Q3SYG4 887 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TEDDM1Q5T9Z0 273 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HECTD2Q5U5R9 776 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 ZNF468Q5VIY5 522 aaPredicted RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 DUPD1Q68J44 220 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TRMT10BQ6PF06 316 aaKnown RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 KIAA0408Q6ZU52 694 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 MCEMP1Q8IX19 187 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 NEIL2Q969S2 332 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TBC1D20Q96BZ9 403 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 FBXL8Q96CD0 374 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 CERS2Q96G23 380 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 CFAP36Q96G28 342 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 SCMH1Q96GD3 660 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HIST1H2AHQ96KK5 128 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 TSNARE1Q96NA8 513 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 OR1F2PQ96R84 312 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 LPAR4Q99677 370 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 HIST1H2AJQ99878 128 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 UTP23Q9BRU9 249 aaKnown RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 HAUS8Q9BT25 410 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 H2AFJQ9BTM1 129 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 SARGQ9BW04 601 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 DDX47Q9H0S4 455 aaKnown RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 SUCOQ9UBS9 1254 aaKnown RBP10.93□□□□□ -0.66
USP3-220ENST00000561381 PKDREJQ9NTG1 2253 aa10.93□□□□□ -0.66
USP3-220ENST00000561381 NPIPA5E9PKD4 350 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 TTI1O43156 1089 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 NEURL1O76050 574 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 FHP07954 510 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 SNRPB2P08579 225 aaKnown RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 ALOX12P18054 663 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 IL10P22301 178 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 IVDP26440 423 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 HTR1EP28566 365 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 HNF4AP41235 474 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 ELK3P41970 407 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 BTG2P78543 158 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 ADORA2A-AS1P86434 159 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 OC90Q02509 493 aaPredicted RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 PWP1Q13610 501 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 CDSNQ15517 529 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 SBSNQ6UWP8 590 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 BNC2Q6ZN30 1099 aaPredicted RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 ZNF808Q8N4W9 903 aaPredicted RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 SLC5A8Q8N695 610 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 ANKRD53Q8N9V6 530 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 NT5CQ8TCD5 201 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 UTP15Q8TED0 518 aaKnown RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 SLC5A11Q8WWX8 675 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 GPR137Q96N19 417 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 FRMD6Q96NE9 622 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 AICDAQ9GZX7 198 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 CDCP1Q9H5V8 836 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 SNX12Q9UMY4 172 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 NPIPA1Q9UND3 350 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 CHMP2BQ9UQN3 213 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 VWA7Q9Y334 891 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 PCDHGB6Q9Y5F9 930 aa10.92□□□□□ -0.66
USP3-220ENST00000561381 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
USP3-220ENST00000561381 LRBAP50851 2863 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ABCA12Q86UK0 2595 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ASPDHA6ND91 283 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 C4orf51C9J302 202 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 NDC80O14777 642 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 SP1P08047 785 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 MAOAP21397 527 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 EEF1DP29692 281 aaKnown RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 SCTRP47872 440 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 AP1S2P56377 157 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 RAB8AP61006 207 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 REEP5Q00765 189 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ALDH6A1Q02252 535 aaKnown RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 RBPJQ06330 500 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 HYAL2Q12891 473 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 CSHL1Q14406 222 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ZNF630Q2M218 657 aaPredicted RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
USP3-220ENST00000561381 NCCRP1Q6ZVX7 275 aaPredicted RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 STRA8Q7Z7C7 330 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 GALNT7Q86SF2 657 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 GABPB2Q8TAK5 448 aaPredicted RBP10.91□□□□□ -0.66
USP3-220ENST00000561381 ELP5Q8TE02 316 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ADAMTS18Q8TE60 1221 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 PTCHD1Q96NR3 888 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 TRIM54Q9BYV2 358 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 RHBGQ9H310 441 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 KLHL31Q9H511 634 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 LRFN1Q9P244 771 aa10.91□□□□□ -0.66
USP3-220ENST00000561381 ZFP69BQ9UJL9 534 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms