RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	C10orf90	Q96M02	699 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	F2RL3	Q96RI0	385 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	YY1AP1	Q9H869	796 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	RNF121	Q9H920	327 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	DNAJC17	Q9NVM6	304 aa	Known RBP	4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	EPHA6	Q9UF33	1036 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	NOCT	Q9UK39	431 aa	Known RBP	4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	MAN1B1	Q9UKM7	699 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	PRDM4	Q9UKN5	801 aa		4.8	□□□□□ -1.64
TCF12-223	ENST00000561235	PARD3	Q8TEW0	1356 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CASZ1	Q86V15	1759 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	EFCAB6	Q5THR3	1501 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	MSGN1	A6NI15	193 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235		E5RGE8	158 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	GOSR1	O95249	250 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	SP1	P08047	785 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CEACAM1	P13688	526 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CD59	P13987	128 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	GNB3	P16520	340 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	PIK3R1	P27986	724 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CLK1	P49759	484 aa	Known RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	MYL7	Q01449	175 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	GLRA4	Q5JXX5	417 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	ARHGAP17	Q68EM7	881 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF790	Q6PG37	636 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	AQP12A	Q8IXF9	295 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	MARVELD2	Q8N4S9	558 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	AMER3	Q8N944	861 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	GPRC5A	Q8NFJ5	357 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	APOBEC4	Q8WW27	367 aa	Known RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	NECTIN4	Q96NY8	510 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	BTBD9	Q96Q07	612 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	CDCA3	Q99618	268 aa	Predicted RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	ATG101	Q9BSB4	218 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	SLCO1C1	Q9NYB5	712 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	GPR132	Q9UNW8	380 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	NSG2	Q9Y328	171 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	LRRIQ1	Q96JM4	1722 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	PLEKHH2	Q8IVE3	1493 aa		4.79	□□□□□ -1.64
TCF12-223	ENST00000561235	ADGRB2	O60241	1585 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ACE	P12821	1306 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ADGRB3	O60242	1522 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	DLC1	Q96QB1	1528 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	IGHV4-4	A0A075B6R2	117 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	TRAV18	A0A075B6X5	111 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	SMIM30	A4D0T7	59 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	HHLA1	C9JL84	531 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF195	O14628	629 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	AP2A2	O94973	939 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	GH1	P01241	217 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	HOXB6	P17509	224 aa	Known RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ANOS1	P23352	680 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	FRK	P42685	505 aa	Predicted RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	GNB1	P62873	340 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ASIC1	P78348	528 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	SMU1	Q2TAY7	513 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF876P	Q49A33	203 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	C5orf24	Q7Z6I8	188 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ANKRD46	Q86W74	232 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	LACC1	Q8IV20	430 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	CLYBL	Q8N0X4	340 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	NIPA2	Q8N8Q9	360 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	GBP7	Q8N8V2	638 aa	Predicted RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	OR4C15	Q8NGM1	316 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	RSPH1	Q8WYR4	309 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	CENPT	Q96BT3	561 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF350	Q9GZX5	532 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	EGLN3	Q9H6Z9	239 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	IARS2	Q9NSE4	1012 aa	Known RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	LEF1	Q9UJU2	399 aa	Predicted RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	FBXL5	Q9UKA1	691 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	ISY1	Q9ULR0	285 aa	Known RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	PA2G4	Q9UQ80	394 aa	Known RBP	4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	FMN1	Q68DA7	1419 aa		4.78	□□□□□ -1.64
TCF12-223	ENST00000561235	IL16	Q14005	1332 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235		A0A0A6YYC8	382 aa	Predicted RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	TRBV4-1	A0A0J9YWV2	114 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ILVBL	A1L0T0	632 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	MTMR11	A4FU01	709 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	PRR23A	A6NEV1	266 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	SDR42E2	A6NKP2	422 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235		I3L1I5	382 aa	Predicted RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	RAF1	P04049	648 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	SLC2A2	P11168	524 aa	Predicted RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	GOT1	P17174	413 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ITGB6	P18564	788 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	CYP2A7	P20853	494 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	SSR1	P43307	286 aa	Known RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	GLIPR1	P48060	266 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ADAR	P55265	1226 aa	Known RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	HNRNPD	Q14103	355 aa	Known RBP	4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	TRIM29	Q14134	588 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ZNF74	Q16587	644 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	KBTBD12	Q3ZCT8	623 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	HSP90AB3P	Q58FF7	597 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ZNF542P	Q5EBM4	170 aa		4.77	□□□□□ -1.65
TCF12-223	ENST00000561235	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms