RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FAM160A2Q8N612 972 aaPredicted RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 CATSPER1Q8NEC5 780 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 GOT1L1Q8NHS2 421 aaPredicted RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 KLHDC7BQ96G42 594 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 CENPKQ9BS16 269 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TCEAL2Q9H3H9 227 aaPredicted RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 TAAR2Q9P1P5 351 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 SNX7Q9UNH6 387 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 KIR2DS5A0A0G2JLQ3 304 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 A0A0G2JNG1 304 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ELOVL7A1L3X0 281 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 FAM221BA6H8Z2 402 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 KIR2DS3K7RE56 304 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 BTN3A3O00478 584 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 CAPN5O15484 640 aaPredicted RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 NDUFS4O43181 175 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 HNRNPRO43390 633 aaKnown RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 GBAP04062 536 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 GSNP06396 782 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ANXA6P08133 673 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 NCK1P16333 377 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 GPX2P18283 190 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 BCL6P41182 706 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 BLKP51451 505 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TAS2R50P59544 299 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 UBE2IP63279 158 aaKnown RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 KIR2DS5Q14953 304 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TMEM35AQ53FP2 167 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 ERMP1Q7Z2K6 904 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 CLECL1Q8IZS7 167 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 TBC1D19Q8N5T2 526 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 SNX19Q92543 992 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 RGMAQ96B86 450 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 AURKBQ96GD4 344 aaPredicted RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
SNX1-211ENST00000560829 SLC6A18Q96N87 628 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 DPH7Q9BTV6 452 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 SRMSQ9H3Y6 488 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 PIF1Q9H611 641 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 LHX9Q9NQ69 397 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 PCDHGA2Q9Y5H1 932 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 AP1M2Q9Y6Q5 423 aa12.34□□□□□ -0.43
SNX1-211ENST00000560829 MYO10Q9HD67 2058 aa12.33□□□□□ -0.43
SNX1-211ENST00000560829 A0A1W2PR77 199 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 C1orf226A1L170 272 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 LRIT2A6NDA9 550 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 EVPLLA8MZ36 301 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 ISM1B1AKI9 464 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 CLIC1O00299 241 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 HAT1O14929 419 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 SCELO95171 688 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 IL10P22301 178 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 POLE2P56282 527 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 C2orf80Q0P641 193 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 MAP7Q14244 749 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 TCEA2Q15560 299 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 CYP51A1Q16850 503 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 PRRT3Q5FWE3 981 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 TBCELQ5QJ74 424 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 CCNYL2Q5T2Q4 361 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 KIAA1614Q5VZ46 1190 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 UBE3DQ7Z6J8 389 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 SERPINA11Q86U17 422 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 IQCHQ86VS3 1027 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 PAQR7Q86WK9 346 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 NUDT13Q86X67 352 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 PLD3Q8IV08 490 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 MICU2Q8IYU8 434 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 MFSD2AQ8NA29 543 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 TRPV3Q8NET8 790 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 LRTOMTQ8WZ04 291 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 POP5Q969H6 163 aaKnown RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 PPCDCQ96CD2 204 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 ZNF764Q96H86 408 aaPredicted RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 SORBS1Q9BX66 1292 aaKnown RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 DDX31Q9H8H2 851 aaKnown RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 TBC1D17Q9HA65 648 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 SH3BP4Q9P0V3 963 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 ANAPC2Q9UJX6 822 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 CNOT11Q9UKZ1 510 aaKnown RBP12.33□□□□□ -0.44
SNX1-211ENST00000560829 LRCH1Q9Y2L9 728 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 SLCO1B1Q9Y6L6 691 aa12.33□□□□□ -0.44
SNX1-211ENST00000560829 GPR37L1O60883 481 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 NDUFS2O75306 463 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 EPN2O95208 641 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 IL3P08700 152 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 BMP2P12643 396 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 PPIBP23284 216 aaKnown RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 TRA2BP62995 288 aaKnown RBP12.32□□□□□ -0.44
SNX1-211ENST00000560829 MC1RQ01726 317 aa12.32□□□□□ -0.44
SNX1-211ENST00000560829 KLC1Q07866 573 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms