RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PTPN7P35236 360 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 TTPAP49638 278 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 GDF10P55107 478 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ABATP80404 500 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 TAP2Q03519 686 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 CDH17Q12864 832 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 KEAP1Q14145 624 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 TYSND1Q2T9J0 566 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 P3H1Q32P28 736 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 FLYWCH1Q4VC44 716 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 AARS2Q5JTZ9 985 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 CTSL3PQ5NE16 218 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 WDR53Q7Z5U6 358 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 LINC00523Q86TU6 105 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 CYP4Z2PQ8N1L4 340 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 KCT2Q8NC54 265 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 LRRN4CLQ8ND94 238 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 OR5T3Q8NGG3 340 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF480Q8WV37 535 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 PDLIM2Q96JY6 352 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 OR1F2PQ96R84 312 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 EBNA1BP2Q99848 306 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ANKHQ9HCJ1 492 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 ABCF3Q9NUQ8 709 aa11.95□□□□□ -0.5
RABGGTA-213ENST00000560127 HEATR5AQ86XA9 2040 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 KCNE1BA0A087WTH5 132 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 SAGE2PA6NJ88 616 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 FIGNL2A6NMB9 653 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 SMAPO00193 183 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 CD3EAPO15446 510 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 DNAJB6O75190 326 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 PSIP1O75475 530 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 IL10P22301 178 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 ATP5DP30049 168 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 GRIA1P42261 906 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 PPIAP62937 165 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 LRRC56Q8IYG6 542 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 CYP4X1Q8N118 509 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 NFAM1Q8NET5 270 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 SLCO2A1Q92959 643 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 TM4SF19Q96DZ7 209 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 SMC6Q96SB8 1091 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 DEFB126Q9BYW3 111 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 ANAPC5Q9UJX4 755 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 NAALAD2Q9Y3Q0 740 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 TCAF1Q9Y4C2 921 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 LIPGQ9Y5X9 500 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 DSCAMO60469 2012 aa11.94□□□□□ -0.5
RABGGTA-213ENST00000560127 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 SYT5O00445 386 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 BCKDKO14874 412 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 NIPSNAP2O75323 286 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF189O75820 626 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 FHP07954 510 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 UQCRC1P31930 480 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 HSD17B2P37059 387 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 PEX19P40855 299 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 RPS15AP62244 130 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 KIF5AQ12840 1032 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 KCNJ11Q14654 390 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 DAZAP2Q15038 168 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 ACSBG2Q5FVE4 666 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 CREB3L4Q8TEY5 395 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 PEX13Q92968 403 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 TBC1D20Q96BZ9 403 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 HES6Q96HZ4 224 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 BIRC8Q96P09 236 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 SARGQ9BW04 601 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 PLEKHF2Q9H8W4 249 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 TMEM184CQ9NVA4 438 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 GALPQ9UBC7 116 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 CUBNO60494 3623 aa11.93□□□□□ -0.5
RABGGTA-213ENST00000560127 MED12Q93074 2177 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 ABCA1O95477 2261 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 A0A0G2JMM0 328 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 A0A1W2PPB8 328 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 A0A1W2PRS3 328 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TCRBV7S2A1N4TA0A589 114 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF839A8K0R7 811 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 KIR3DP1A8MWS1 328 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 GOLGA6L6A8MZA4 724 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC16A5O15375 505 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 NDUFS3O75489 264 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TJP3O95049 919 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 GAS8O95995 478 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms