RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 A0A0G2JND7 137 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 ATP6AP2A0A1C7CYW4 349 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ARHGAP10A1A4S6 786 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 EME2A4GXA9 379 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 GMNCA6NCL1 334 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 SLC9B1P1A6NJY1 282 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 OR5K4A6NMS3 321 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 C2orf74A8MZ97 194 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 MANBAO00462 879 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZNF195O14628 629 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 KLF11O14901 512 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 AZIN1O14977 448 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 YKT6O15498 198 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 NUDT21O43809 227 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 LCMT2O60294 686 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 PCDHGA12O60330 932 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CTSVO60911 334 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 H2AFYO75367 372 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 CRCPO75575 148 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ATP6AP2O75787 350 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 PDYNP01213 254 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 C9P02748 559 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ALPPL2P10696 532 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 HGFP14210 728 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CDH3P22223 829 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CD1CP29017 333 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 EPHA3P29320 983 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 DPP6P42658 865 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 PDX1P52945 283 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 AQP5P55064 265 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CSNK1G2P78368 415 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 HMGCS1Q01581 520 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 IRF8Q02556 426 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 PWP1Q13610 501 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 RBBP5Q15291 538 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZRSR2Q15696 482 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 UGT3A2Q3SY77 523 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CDKL4Q5MAI5 379 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 STPG1Q5TH74 334 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 TMEM198Q66K66 360 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 FRMPD2BQ6IN97 320 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 GRHL2Q6ISB3 625 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 LCTLQ6UWM7 567 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 RGS9BPQ6ZS82 235 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 MILR1Q7Z6M3 343 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 B3GNT8Q7Z7M8 397 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CDH24Q86UP0 819 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 PAQR7Q86WK9 346 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 C17orf64Q86WR6 236 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CRLF3Q8IUI8 442 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 WDR75Q8IWA0 830 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 DDIASQ8IXT1 998 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 KIAA2013Q8IYS2 634 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 C19orf47Q8N9M1 422 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 DEFB124Q8NES8 71 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 HMGCLL1Q8TB92 370 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 BAHD1Q8TBE0 780 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 RAB3IL1Q8TBN0 382 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 MAGEC3Q8TD91 643 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZNF473Q8WTR7 871 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 TWIST2Q8WVJ9 160 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 C10orf82Q8WW14 230 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CCDC126Q96EE4 140 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 CRELD1Q96HD1 420 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 AHCYL2Q96HN2 611 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 C7orf26Q96N11 449 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 OR52B2Q96RD2 323 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZNF382Q96SR6 550 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 MTERF1Q99551 399 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 ELAC2Q9BQ52 826 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 DPH2Q9BQC3 489 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 DPH7Q9BTV6 452 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 SORBS1Q9BX66 1292 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 TMEM120AQ9BXJ8 343 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 EBPLQ9BY08 206 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ACPTQ9BZG2 426 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 TWSG1Q9GZX9 223 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 STN1Q9H668 368 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 WDR55Q9H6Y2 383 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 KCNK13Q9HB14 408 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 FAM60AQ9NP50 221 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 TMEM9BQ9NQ34 198 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 STARD5Q9NSY2 213 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 THAP1Q9NVV9 213 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 OR6C2Q9NZP2 312 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 FTSJ1Q9UET6 329 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 LNPEPQ9UIQ6 1025 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ADAM30Q9UKF2 790 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 POMT2Q9UKY4 750 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZNF490Q9ULM2 529 aaPredicted RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 TMCO1Q9UM00 188 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 MRPS2Q9Y399 296 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 RAP2CQ9Y3L5 183 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 TRAF6Q9Y4K3 522 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 TNPO3Q9Y5L0 923 aaKnown RBP4.99□□□□□ -1.61
SPG11-220ENST00000559933 DNAJC15Q9Y5T4 150 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 USH1CQ9Y6N9 552 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 ZNF292O60281 2723 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms