RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 IL1RNP18510 177 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 AGXTP21549 392 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 ARRB2P32121 409 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 EIF2S3P41091 472 aaKnown RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 DCDP81605 110 aaKnown RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 GALNT1Q10472 559 aaPredicted RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 CHI3L2Q15782 390 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 NKAIN1Q4KMZ8 207 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 CES4AQ5XG92 561 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 TTC19Q6DKK2 380 aaPredicted RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 ABHD13Q7L211 337 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 PRSS41Q7RTY9 318 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 RNF175Q8N4F7 328 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 IL22RA1Q8N6P7 574 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 KDF1Q8NAX2 398 aaPredicted RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 PPP1R14CQ8TAE6 165 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 CT55Q8WUE5 264 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 MS4A6EQ96DS6 147 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 NAF1Q96HR8 494 aaKnown RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 MTERF1Q99551 399 aaKnown RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 PAIP2Q9BPZ3 127 aaKnown RBP20.59■□□□□ 0.89
SNX1-206ENST00000559389 KLHL31Q9H511 634 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 ELOVL6Q9H5J4 265 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 TNFRSF12AQ9NP84 129 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 SLC22A11Q9NSA0 550 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 PPT2Q9UMR5 302 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 SNX6Q9UNH7 406 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 RAXQ9Y2V3 346 aa20.59■□□□□ 0.89
SNX1-206ENST00000559389 LOC101059948A0A1B0GTJ6 334 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 MAGEB17A8MXT2 336 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 TAF4O00268 1085 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 FOXE1O00358 373 aaPredicted RBP20.58■□□□□ 0.89
SNX1-206ENST00000559389 KLHL18O94889 574 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 SMIM10L1P0DMW3 83 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 ALOX12P18054 663 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 HMOX2P30519 316 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 NEK2P51955 445 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 IFT88Q13099 833 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 DSG2Q14126 1118 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 HERC3Q15034 1050 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 ARL13AQ5H913 290 aaPredicted RBP20.58■□□□□ 0.89
SNX1-206ENST00000559389 TCHHL1Q5QJ38 904 aaPredicted RBP20.58■□□□□ 0.89
SNX1-206ENST00000559389 FAM199XQ6PEV8 388 aaPredicted RBP20.58■□□□□ 0.89
SNX1-206ENST00000559389 COX15Q7KZN9 410 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 CUZD1Q86UP6 607 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 PDSS2Q86YH6 399 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 OR9A4Q8NGU2 314 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 FKBP10Q96AY3 582 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 CMTM7Q96FZ5 175 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 SMIM10Q96HG1 83 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 KCNA7Q96RP8 456 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 DPH1Q9BZG8 443 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 REXO4Q9GZR2 422 aaKnown RBP20.58■□□□□ 0.89
SNX1-206ENST00000559389 ANKHQ9HCJ1 492 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 CROTQ9UKG9 612 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 CDC14AQ9UNH5 594 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 MAU2Q9Y6X3 613 aa20.58■□□□□ 0.89
SNX1-206ENST00000559389 TMEM114B3SHH9 223 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 C21orf140B9A014 251 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 C9J4A7 227 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 H0YIG0 161 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 MANBAO00462 879 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 ERI3O43414 337 aaKnown RBP20.57■□□□□ 0.88
SNX1-206ENST00000559389 GALR3O60755 368 aaPredicted RBP20.57■□□□□ 0.88
SNX1-206ENST00000559389 TGFB1P01137 390 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 KRT6AP02538 564 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 KRT6BP04259 564 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 BGNP21810 368 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 OR1D4P47884 311 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 KRT6CP48668 564 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 HTR6P50406 440 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 FOXA1P55317 472 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 RPS13P62277 151 aaKnown RBP20.57■□□□□ 0.88
SNX1-206ENST00000559389 DNASE1L3Q13609 305 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 SLC9A5Q14940 896 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 NCF4Q15080 339 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 DEFB134Q4QY38 66 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 TMEM35AQ53FP2 167 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 ARHGAP40Q5TG30 622 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 KHDRBS2Q5VWX1 349 aaKnown RBP20.57■□□□□ 0.88
SNX1-206ENST00000559389 VASH2Q86V25 355 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 AMER3Q8N944 861 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 OR2L5Q8NG80 312 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 METTL6Q8TCB7 284 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 C17orf62Q9BQA9 187 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 SHCBP1LQ9BZQ2 653 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 ZNF304Q9HCX3 659 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 FARSBQ9NSD9 589 aaKnown RBP20.57■□□□□ 0.88
SNX1-206ENST00000559389 PSD3Q9NYI0 1048 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 NAALAD2Q9Y3Q0 740 aa20.57■□□□□ 0.88
SNX1-206ENST00000559389 CEP295Q9C0D2 2601 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 KLK10O43240 276 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 ETHE1O95571 254 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 PIM1P11309 404 aaPredicted RBP20.56■□□□□ 0.88
SNX1-206ENST00000559389 FBLP22087 321 aaKnown RBP20.56■□□□□ 0.88
SNX1-206ENST00000559389 DLSTP36957 453 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 AVPR1BP47901 424 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 RAB8AP61006 207 aa20.56■□□□□ 0.88
SNX1-206ENST00000559389 PPP2R2AP63151 447 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms