RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 BMPR2Q13873 1038 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SLBPQ14493 270 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNX1-205ENST00000559339 ABRAXAS2Q15018 415 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 OR4D1Q15615 310 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 NSDHLQ15738 373 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TBCCQ15814 346 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PFKFB4Q16877 469 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ZXDCQ2QGD7 858 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 FAAH2Q6GMR7 532 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 METTL2BQ6P1Q9 378 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 MED27Q6P2C8 311 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TRIM40Q6P9F5 258 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KIRREL2Q6UWL6 708 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SLCO4C1Q6ZQN7 724 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 RIPOR1Q6ZS17 1223 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 CHSY3Q70JA7 882 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 COX15Q7KZN9 410 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 VN1R4Q7Z5H5 301 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PPP1R32Q7Z5V6 425 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 LAPTM4BQ86VI4 370 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 LCA5Q86VQ0 697 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ATCAYQ86WG3 371 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 MYLK4Q86YV6 388 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 SPNS2Q8IVW8 549 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KBTBD2Q8IY47 623 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KLHDC8AQ8IYD2 350 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ARHGEF39Q8N4T4 335 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 DTWD1Q8N5C7 304 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 AMER3Q8N944 861 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KCT2Q8NC54 265 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 C7orf57Q8NEG2 295 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ARMC2Q8NEN0 867 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 OR11G2Q8NGC1 345 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ZCCHC10Q8TBK6 192 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KCTD4Q8WVF5 259 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ATP6V1E2Q96A05 226 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TBC1D20Q96BZ9 403 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 NXNL1Q96CM4 212 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 REPS1Q96D71 796 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 PEX11GQ96HA9 241 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 THOC3Q96J01 351 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 SCYL1Q96KG9 808 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 KCNC2Q96PR1 638 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SMAD5Q99717 465 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 MACROD1Q9BQ69 325 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TUBB6Q9BUF5 446 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 NUDT9Q9BW91 350 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 FUT8Q9BYC5 575 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ROGDIQ9GZN7 287 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 REXO4Q9GZR2 422 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 LHPPQ9H008 270 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ILKAPQ9H0C8 392 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 NT5DC2Q9H857 520 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ACTR8Q9H981 624 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 COPS7BQ9H9Q2 264 aaPredicted RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 PPCSQ9HAB8 311 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ZNF160Q9HCG1 818 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 MLXIPLQ9NP71 852 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 IGSF5Q9NSI5 407 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 RIC8BQ9NVN3 520 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 HCN3Q9P1Z3 774 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ABI3Q9P2A4 366 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ADGRE2Q9UHX3 823 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TMCO1Q9UM00 188 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SH2B3Q9UQQ2 575 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 MRPS33Q9Y291 106 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 B3GNT3Q9Y2A9 372 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 HS3ST3B1Q9Y662 390 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 SPACA6W5XKT8 324 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 ZNF462Q96JM2 2506 aa4.14□□□□□ -1.75
SNX1-205ENST00000559339 TLN1Q9Y490 2541 aaKnown RBP4.14□□□□□ -1.75
SNX1-205ENST00000559339 LOC102723996A0A087X1L8 192 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 IGHV1-45A0A0A0MS14 117 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 HMX2A2RU54 273 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 LRIT2A6NDA9 550 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MAGEB17A8MXT2 336 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TRIM49D1C9J1S8 452 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UBXN8O00124 270 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 FFAR3O14843 346 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 GPR42O15529 346 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 TAPBPO15533 448 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ERI3O43414 337 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 CHST10O43529 356 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 B3GALT2O43825 422 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PRMT3O60678 531 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 UGDHO60701 494 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 GALR3O60755 368 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 SMIM24O75264 130 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 ALOX12BO75342 701 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 VPS4BO75351 444 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 RDH16O75452 317 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CLEC3AO75596 197 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 CDC123O75794 336 aaPredicted RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 WFS1O76024 890 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 MED26O95402 600 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 SERPINA7P05543 415 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 FHP07954 510 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 PCNAP12004 261 aa4.13□□□□□ -1.75
SNX1-205ENST00000559339 RNH1P13489 461 aaKnown RBP4.13□□□□□ -1.75
SNX1-205ENST00000559339 TAC1P20366 129 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms