RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SLC27A4Q6P1M0 643 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CD164L2Q6UWJ8 174 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ABRAXAS1Q6UWZ7 409 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 DLEU7Q6UYE1 221 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM64Q6YI46 380 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 C1orf186Q6ZWK4 172 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TUBA1AQ71U36 451 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ANO5Q75V66 913 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 G2E3Q7L622 706 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ANKRD33Q7Z3H0 272 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 CCDC60Q8IWA6 550 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 RCOR2Q8IZ40 523 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TCEANCQ8N8B7 351 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MAPKAPK5-AS1Q8N8E1 139 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MAB21L3Q8N8X9 362 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 RNF149Q8NC42 400 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF540Q8NDQ6 660 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TRPV3Q8NET8 790 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GPRC5AQ8NFJ5 357 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 UBTD2Q8WUN7 234 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SELENOMQ8WWX9 145 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 THRSPQ92748 146 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ESAMQ96AP7 390 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM186Q96B77 213 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MED30Q96HR3 178 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ST6GAL2Q96JF0 529 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MARK4Q96L34 752 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 C4orf45Q96LM5 186 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 IL17FQ96PD4 163 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 FCRL4Q96PJ5 515 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SPAG8Q99932 426 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TUBA1CQ9BQE3 449 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF577Q9BSK1 485 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM204Q9BSN7 226 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TEX13BQ9BXU2 312 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ATG10Q9H0Y0 220 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 IL25Q9H293 177 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TFB2MQ9H5Q4 396 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 GAREM1Q9H706 876 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 MARCH7Q9H992 704 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 C3orf14Q9HBI5 128 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 RAVER2Q9HCJ3 691 aaKnown RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SLC35D1Q9NTN3 355 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF701Q9NV72 531 aaPredicted RBP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TMOD2Q9NZR1 351 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 TAAR2Q9P1P5 351 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 NARFQ9UHQ1 456 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 PSORS1C1Q9UIG5 152 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 ERVK-19Q9WJR5 959 aa2.1□□□□□ -2.07
GABPB1-209ENST00000559100 KIAA1217Q5T5P2 1943 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CKAP5Q14008 2032 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 IGLV9-49A0A0B4J1Y8 123 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 A0A1W2PS18 150 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 DENND3A2RUS2 1198 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 ANTXRLA6NF34 631 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 SRRM3A6NNA2 597 aaPredicted RBP2.09□□□□□ -2.07
GABPB1-209ENST00000559100 SNURFLB1AK76 121 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 H0YCG3 227 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 O00370 1275 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 ATP6V0E1O15342 81 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 SYT7O43581 403 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 EXTL3O43909 919 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CIDEAO60543 219 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 HMMRO75330 724 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 STBD1O95210 358 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 BMP15O95972 392 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 AK1P00568 194 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 MT-ND2P03891 347 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 LYNP07948 512 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 IGHV4-31P0DP07 118 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 FGF5P12034 268 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 PRG2P13727 222 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 GNSP15586 552 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CA6P23280 308 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 GJB2P29033 226 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 RBMS1P29558 406 aaKnown RBP2.09□□□□□ -2.07
GABPB1-209ENST00000559100 DUTP33316 252 aaKnown RBP2.09□□□□□ -2.07
GABPB1-209ENST00000559100 MAGEA4P43358 317 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TRPC1P48995 793 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TNFSF10P50591 281 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 GAS1P54826 345 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 C21orf58P58505 322 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 DSCR9P59020 149 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 B3GALT5-AS1P59052 145 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 NANOS3P60323 173 aaKnown RBP2.09□□□□□ -2.07
GABPB1-209ENST00000559100 SSTP61278 116 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 HERV-K104P61576 105 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 HERV-K104P63124 156 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CCZ1BP86790 482 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CCZ1P86791 482 aaPredicted RBP2.09□□□□□ -2.07
GABPB1-209ENST00000559100 GPR17Q13304 367 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 SGCGQ13326 291 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 RAPSNQ13702 412 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 CEACAM7Q14002 265 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 DPYSQ14117 519 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TRIM29Q14134 588 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TRADDQ15628 312 aa2.09□□□□□ -2.07
GABPB1-209ENST00000559100 TPD52L1Q16890 204 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms