RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 RAB8AP61006 207 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 STXBP1P61764 594 aaKnown RBP20.26■□□□□ 0.83
CRNDE-205ENST00000558952 SLBPQ14493 270 aaKnown RBP eCLIP20.26■□□□□ 0.83
CRNDE-205ENST00000558952 OR4D1Q15615 310 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 NSDHLQ15738 373 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 B3GNTL1Q67FW5 361 aaPredicted RBP20.26■□□□□ 0.83
CRNDE-205ENST00000558952 SLCO4C1Q6ZQN7 724 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 ANKRD37Q7Z713 158 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 MNS1Q8NEH6 495 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 UTP15Q8TED0 518 aaKnown RBP20.26■□□□□ 0.83
CRNDE-205ENST00000558952 PSMF1Q92530 271 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 EXT2Q93063 718 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 KIAA1191Q96A73 305 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 TBC1D20Q96BZ9 403 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 UBXN10Q96LJ8 280 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 IMMP1LQ96LU5 166 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 TMEM79Q9BSE2 394 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 SLC6A16Q9GZN6 736 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 CLK4Q9HAZ1 481 aaKnown RBP20.26■□□□□ 0.83
CRNDE-205ENST00000558952 NMRAL1Q9HBL8 299 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 TEKT2Q9UIF3 430 aa20.26■□□□□ 0.83
CRNDE-205ENST00000558952 IGHV3-20A0A0C4DH32 117 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CLEC18AA5D8T8 446 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 TAPBPO15533 448 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CHST10O43529 356 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 STK16O75716 305 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 SERPINA6P08185 405 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 ITGAMP11215 1152 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 GSTM2P28161 218 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 SOX11P35716 441 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 GGT5P36269 586 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 TSFMP43897 325 aaKnown RBP20.25■□□□□ 0.83
CRNDE-205ENST00000558952 HSPA7P48741 367 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 OLR1P78380 273 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 ACTN3Q08043 901 aaPredicted RBP20.25■□□□□ 0.83
CRNDE-205ENST00000558952 ABRAXAS2Q15018 415 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 EFTUD2Q15029 972 aaKnown RBP eCLIP20.25■□□□□ 0.832e-6■■■■□ 19.4
CRNDE-205ENST00000558952 NR6A1Q15406 480 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 BTBD16Q32M84 506 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 TOR1AIP1Q5JTV8 583 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CLEC18BQ6UXF7 455 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 TMIGD1Q6UXZ0 262 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CMC1Q7Z7K0 106 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.25■□□□□ 0.83
CRNDE-205ENST00000558952 SHISA5Q8N114 240 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 SNX31Q8N9S9 440 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CLEC18CQ8NCF0 446 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 PDPRQ8NCN5 879 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 STAG3L4Q8TBR4 150 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 CCT6BQ92526 530 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 PITHD1Q9GZP4 211 aaPredicted RBP20.25■□□□□ 0.83
CRNDE-205ENST00000558952 ZDHHC18Q9NUE0 388 aa20.25■□□□□ 0.83
CRNDE-205ENST00000558952 OR2W5A6NFC9 320 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 MAGEB17A8MXT2 336 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 PSMD12O00232 456 aaPredicted RBP20.24■□□□□ 0.83
CRNDE-205ENST00000558952 AGFG2O95081 481 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 B3GALT4O96024 378 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 MRPL49Q13405 166 aaKnown RBP20.24■□□□□ 0.83
CRNDE-205ENST00000558952 ELOAQ14241 798 aaKnown RBP20.24■□□□□ 0.83
CRNDE-205ENST00000558952 PDK4Q16654 411 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 ABHD17BQ5VST6 288 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 PLAG1Q6DJT9 500 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 PLPP5Q8NEB5 264 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 CREB3L4Q8TEY5 395 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 MRRFQ96E11 262 aaKnown RBP20.24■□□□□ 0.83
CRNDE-205ENST00000558952 FAR2Q96K12 515 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 LPAR4Q99677 370 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 EHD1Q9H4M9 534 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 ALG9Q9H6U8 611 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 LANCL2Q9NS86 450 aa20.24■□□□□ 0.83
CRNDE-205ENST00000558952 CTAGE15A4D2H0 777 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 ANKDD1BA6NHY2 528 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 CCNT2O60583 730 aaKnown RBP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 TUBB4AP04350 444 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 LTA4HP09960 611 aaKnown RBP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 SLC35E2BP0CK96 405 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 TFEBP19484 476 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 HPDP32754 393 aaPredicted RBP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 RHAGQ02094 409 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 SRSF1Q07955 248 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■■□ 26.7
CRNDE-205ENST00000558952 HYAL2Q12891 473 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 UAP1Q16222 522 aaPredicted RBP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 EXT1Q16394 746 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 SFT2D3Q587I9 215 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 FBXO48Q5FWF7 155 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 CTAGE6Q86UF2 777 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 MMGT1Q8N4V1 131 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 CATSPER1Q8NEC5 780 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 OR1N1Q8NGS0 311 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 ESAMQ96AP7 390 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 SEC16BQ96JE7 1060 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 MAGEB10Q96LZ2 347 aaPredicted RBP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.23■□□□□ 0.83
CRNDE-205ENST00000558952 TSPYL1Q9H0U9 437 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 KLHL31Q9H511 634 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 NT5DC2Q9H857 520 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 PRM3Q9NNZ6 103 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 PLA2G3Q9NZ20 509 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 NUDT4Q9NZJ9 180 aa20.23■□□□□ 0.83
CRNDE-205ENST00000558952 ACOT9Q9Y305 439 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms