RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 PLPP5Q8NEB5 264 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 CATSPER1Q8NEC5 780 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 TRPV3Q8NET8 790 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 GRHL3Q8TE85 626 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 CREB3L4Q8TEY5 395 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 PEX11GQ96HA9 241 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 SMIM10Q96HG1 83 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 SLX1AQ9BQ83 275 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 RBCK1Q9BYM8 510 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 AICDAQ9GZX7 198 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 RAB17Q9H0T7 212 aa16.03■□□□□ 0.16
LRRC28-210ENST00000558879 UTP11Q9Y3A2 253 aaKnown RBP16.03■□□□□ 0.16
LRRC28-210ENST00000558879 DYTNA2CJ06 578 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 ANKUB1A6NFN9 424 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 MAGEB17A8MXT2 336 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 PHGDHO43175 533 aaKnown RBP16.02■□□□□ 0.16
LRRC28-210ENST00000558879 WDR47O94967 919 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 B3GALT4O96024 378 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 CD1DP15813 335 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 GGT5P36269 586 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 SLC12A2P55011 1212 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 CAV1Q03135 178 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 H3F3CQ6NXT2 135 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 SLCO4C1Q6ZQN7 724 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 ABHD13Q7L211 337 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 FAR1Q8WVX9 515 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 TSLPQ969D9 159 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 TSPAN17Q96FV3 270 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 UBXN10Q96LJ8 280 aa16.02■□□□□ 0.16
LRRC28-210ENST00000558879 ERRFI1Q9UJM3 462 aaPredicted RBP16.02■□□□□ 0.16
LRRC28-210ENST00000558879 TRAV17A0A0B4J275 112 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 TAPBPO15533 448 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 DNAJB6O75190 326 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 CDC123O75794 336 aaPredicted RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 WFS1O76024 890 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 FHP07954 510 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 SERPINA6P08185 405 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 CCDC166P0CW27 439 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 EDN3P14138 238 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 STMN1P16949 149 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 GNAZP19086 355 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 GDF5P43026 501 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 PLTPP55058 493 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 OLR1P78380 273 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 USP10Q14694 798 aaKnown RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 ABRAXAS2Q15018 415 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 TRADDQ15628 312 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 BTBD16Q32M84 506 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 KBTBD12Q3ZCT8 623 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 CDKL4Q5MAI5 379 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 ZNF324BQ6AW86 544 aaPredicted RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 PAPD4Q6PIY7 484 aaKnown RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 C3orf62Q6ZUJ4 267 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 TCAIMQ8N3R3 496 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 PDPRQ8NCN5 879 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 PRR7Q8TB68 274 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 TBC1D20Q96BZ9 403 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 UNKQ9C0B0 810 aaKnown RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 CLK4Q9HAZ1 481 aaKnown RBP16.01■□□□□ 0.15
LRRC28-210ENST00000558879 LRRC4CQ9HCJ2 640 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 PLA2G3Q9NZ20 509 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 GPRC5BQ9NZH0 403 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 TXNDC16Q9P2K2 825 aa16.01■□□□□ 0.15
LRRC28-210ENST00000558879 EML6Q6ZMW3 1958 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 GTF3C1Q12789 2109 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 OR5H15A6NDH6 313 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 URADA6NGE7 173 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 CHST10O43529 356 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 DDAH2O95865 285 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 WDPCPO95876 746 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 LDLRP01130 860 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 SERPIND1P05546 499 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 C1GALT1C1LP0DN25 315 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 JAK1P23458 1154 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 GSTM2P28161 218 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 TDGF1P3P51864 188 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 RAB10P61026 200 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 ATP6V0D1P61421 351 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 OR4D1Q15615 310 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 EXT1Q16394 746 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 SFT2D3Q587I9 215 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 FAM180AQ6UWF9 173 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 QSOX2Q6ZRP7 698 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 SPATA6LQ8N4H0 392 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 OR1N1Q8NGS0 311 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 M1APQ8TC57 530 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 TAAR6Q96RI8 345 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 NPAS2Q99743 824 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 EHD1Q9H4M9 534 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 KLHL31Q9H511 634 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 MMP25Q9NPA2 562 aa16■□□□□ 0.15
LRRC28-210ENST00000558879 NCOA6Q14686 2063 aaPredicted RBP15.99■□□□□ 0.15
LRRC28-210ENST00000558879 IGKV3D-11A0A0A0MRZ8 115 aa15.99■□□□□ 0.15
LRRC28-210ENST00000558879 NCF1BA6NI72 391 aaPredicted RBP15.99■□□□□ 0.15
LRRC28-210ENST00000558879 NCF1CA8MVU1 366 aaPredicted RBP15.99■□□□□ 0.15
LRRC28-210ENST00000558879 PRAMEF4O60810 478 aa15.99■□□□□ 0.15
LRRC28-210ENST00000558879 TBX6O95947 436 aaPredicted RBP15.99■□□□□ 0.15
LRRC28-210ENST00000558879 NCF1P14598 390 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms