RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CIARTQ8N365 385 aaPredicted RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 RAB42Q8N4Z0 105 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 KBTBD8Q8NFY9 601 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 OR2T11Q8NH01 316 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 GANCQ8TET4 914 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 ARHGAP45Q92619 1136 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 GUCD1Q96NT3 240 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 IL12RB2Q99665 862 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 TEX13AQ9BXU3 409 aaPredicted RBP3.92□□□□□ -1.78
CASC4-206ENST00000558847 SLC39A8Q9C0K1 460 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 MDFICQ9P1T7 246 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 POLKQ9UBT6 870 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 TRIM10Q9UDY6 481 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 RNF123Q5XPI4 1314 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 NOTCH4Q99466 2003 aa3.92□□□□□ -1.78
CASC4-206ENST00000558847 IQCMA0A1B0GVH7 501 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 FPGTO14772 594 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ACSL4O60488 711 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 SEC22BO75396 215 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 NME6O75414 186 aaPredicted RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 SEC24AO95486 1093 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 NGFP01138 241 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 HMBSP08397 361 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 PRSS56P0CW18 603 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ANPEPP15144 967 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 GOT1P17174 413 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 CTNNA2P26232 953 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ALDH1B1P30837 517 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 DUTP33316 252 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 ADARP55265 1226 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 STARD6P59095 220 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 FKBP1BP68106 108 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 WASHC5Q12768 1159 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 PARP10Q53GL7 1025 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 C9orf50Q5SZB4 431 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 SLC27A4Q6P1M0 643 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 DHRS11Q6UWP2 260 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ASPGQ86U10 573 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 LAX1Q8IWV1 398 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ZNF619Q8N2I2 560 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ELMOD1Q8N336 334 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 HDDC3Q8N4P3 179 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 SIDT2Q8NBJ9 832 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 APOBEC4Q8WW27 367 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 SEPT8Q92599 483 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 RFT1Q96AA3 541 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ZNF524Q96C55 264 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 LURAP1Q96LR2 239 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 DDX50Q9BQ39 737 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 UBAC1Q9BSL1 405 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 P2RY12Q9H244 342 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 C5orf66Q9H5L9 145 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 EGLN3Q9H6Z9 239 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 RAB9BQ9NP90 201 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 SLC52A3Q9NQ40 469 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 RNF186Q9NXI6 227 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 HACD3Q9P035 362 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 TRMT6Q9UJA5 497 aaKnown RBP3.91□□□□□ -1.78
CASC4-206ENST00000558847 DOCK7Q96N67 2140 aa3.91□□□□□ -1.78
CASC4-206ENST00000558847 ABCC9O60706 1549 aa3.9□□□□□ -1.78
CASC4-206ENST00000558847 A0A087WW49 117 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SNURFLB1AK76 121 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 TCP10L2B9ZVM9 353 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 H3BMM5 538 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 CCL24O00175 119 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 KRT86O43790 486 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 VEGFDO43915 354 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 KIF5CO60282 957 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 KHDRBS3O75525 346 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 BCAS2O75934 225 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 NADKO95544 446 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 SFTPBP07988 381 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SERPINF2P08697 491 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 ABHD2P08910 425 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 CCDC192P0DO97 292 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 MT3P25713 68 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 HLA-FP30511 346 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SRD5A2P31213 254 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 STIP1P31948 543 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 TIMP3P35625 211 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 OR3A2P47893 321 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 LBX1P52954 281 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 GUCY2DQ02846 1103 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 GFPT1Q06210 699 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 KRT81Q14533 505 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 EFTUD2Q15029 972 aaKnown RBP eCLIP3.9□□□□□ -1.79
CASC4-206ENST00000558847 EXT1Q16394 746 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 HFEQ30201 348 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 FAM76BQ5HYJ3 339 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 ATP1A1-AS1Q5TC04 95 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 ZNF776Q68DI1 518 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 SLC25A47Q6Q0C1 308 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 FIP1L1Q6UN15 594 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 SIGLEC15Q6ZMC9 328 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 CYP4V2Q6ZWL3 525 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 BATF2Q8N1L9 274 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SFRP1Q8N474 314 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms