RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CPEB2Q7Z5Q1 589 aaKnown RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ADAMTSL2Q86TH1 951 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 HPS6Q86YV9 775 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 FAM26EQ8N5C1 309 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 TBC1D19Q8N5T2 526 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 NOA1Q8NC60 698 aaKnown RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 UTP15Q8TED0 518 aaKnown RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 TSPAN17Q96FV3 270 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 TMEM79Q9BSE2 394 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 DERL2Q9GZP9 239 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ZNF700Q9H0M5 742 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 EPS8L2Q9H6S3 715 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ALG9Q9H6U8 611 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 PELI2Q9HAT8 420 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 RIC8BQ9NVN3 520 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 CD274Q9NZQ7 290 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ZFP69BQ9UJL9 534 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ASB1Q9Y576 335 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ZGRF1Q86YA3 2104 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 LOC102723996A0A087X1L8 192 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 MYOCOSA0A1B0GUC4 107 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 KLHL41O60662 606 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 GALR3O60755 368 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 PRAMEF4O60810 478 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 H2AFYO75367 372 aaKnown RBP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 RNF224P0DH78 156 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 C1GALT1C1LP0DN25 315 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SPRP35270 261 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SLC6A12P48065 614 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 RAB10P61026 200 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 BTN3A2P78410 334 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 CAV1Q03135 178 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 HYAL2Q12891 473 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 CBLBQ13191 982 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 MFAP5Q13361 173 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 NSDHLQ15738 373 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 BTBD16Q32M84 506 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SFT2D3Q587I9 215 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 GRTP1Q5TC63 336 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 FHL5Q5TD97 284 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 MROH9Q5TGP6 573 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 PRAMEF9Q5VWM5 478 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SLCO4C1Q6ZQN7 724 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 AFAP1L2Q8N4X5 818 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 NT5CQ8TCD5 201 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SREK1Q8WXA9 508 aaKnown RBP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 NXNL1Q96CM4 212 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 IMMP1LQ96LU5 166 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMAD3-208ENST00000558827 POPDC3Q9HBV1 291 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 LANCL2Q9NS86 450 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 RNF112Q9ULX5 631 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SLC22A7Q9Y694 548 aa11.8□□□□□ -0.52
SMAD3-208ENST00000558827 SUPT3HB4E1H0 165 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 UBXN8O00124 270 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 MAN1A2O60476 641 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 CCNT2O60583 730 aaKnown RBP11.79□□□□□ -0.52
SMAD3-208ENST00000558827 SUPT3HO75486 399 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 WDPCPO95876 746 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 S100BP04271 92 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-208ENST00000558827 GSTA2P09210 222 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 TFEBP19484 476 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 AGTR2P50052 363 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 OR4D2P58180 307 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 CDKL1Q00532 357 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 IRF9Q00978 393 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 RHAGQ02094 409 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ZNF33BQ06732 778 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 PWP1Q13610 501 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ZNF169Q14929 603 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ABRAXAS2Q15018 415 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 HERC3Q15034 1050 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 CRB2Q5IJ48 1285 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 IGFL2Q6UWQ7 119 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ZNF572Q7Z3I7 529 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-208ENST00000558827 GRHL3Q8TE85 626 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 CREB3L4Q8TEY5 395 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 KCTD4Q8WVF5 259 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ANKRD7Q92527 254 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 PTCHD1Q96NR3 888 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 LMF1Q96S06 567 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 SLC29A3Q9BZD2 475 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 KCNK13Q9HB14 408 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ZDHHC18Q9NUE0 388 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 DNAJC11Q9NVH1 559 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 ANKRD10Q9NXR5 420 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 STMN3Q9NZ72 180 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 NINJ2Q9NZG7 142 aa11.79□□□□□ -0.52
SMAD3-208ENST00000558827 DMGDHQ9UI17 866 aaKnown RBP11.79□□□□□ -0.52
SMAD3-208ENST00000558827 A1L4Q6 167 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 DYTNA2CJ06 578 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 STK16O75716 305 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms