RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MTFMTQ96DP5 389 aaKnown RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 MAGEB10Q96LZ2 347 aaPredicted RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 KCNA7Q96RP8 456 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 MTERF1Q99551 399 aaKnown RBP16.58■□□□□ 0.24
TPM1-214ENST00000558544 MS4A8Q9BY19 250 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 CROTQ9UKG9 612 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 ACACBO00763 2458 aa16.58■□□□□ 0.24
TPM1-214ENST00000558544 ANKRD11Q6UB99 2663 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 A0A0A6YYC8 382 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 C4orf51C9J302 202 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 BIRC5O15392 142 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 KLK10O43240 276 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 NPHS1O60500 1241 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 ESRRBO95718 433 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 B3GALT4O96024 378 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 CAPN1P07384 714 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 SERPINB1P30740 379 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 DLSTP36957 453 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 NEK2P51955 445 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 SLC18A1P54219 525 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 WDR4P57081 412 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 STXBP1P61764 594 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 RPS13P62277 151 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 PHEXP78562 749 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 IFT88Q13099 833 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 SRSF6Q13247 344 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 FAM53BQ14153 422 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 NKAIN1Q4KMZ8 207 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 TCHHL1Q5QJ38 904 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 ARHGAP40Q5TG30 622 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 FRG2Q64ET8 278 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 FAM198BQ6UWH4 519 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 ZNF517Q6ZMY9 492 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 ABHD13Q7L211 337 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 KDF1Q8NAX2 398 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 OR9A4Q8NGU2 314 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 PPP1R14CQ8TAE6 165 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 UTP15Q8TED0 518 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 MVB12AQ96EY5 273 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 MMABQ96EY8 250 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 CNDP1Q96KN2 507 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 FRG2BQ96QU4 278 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 DPH2Q9BQC3 489 aaPredicted RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 DPH1Q9BZG8 443 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 ELOVL6Q9H5J4 265 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 DMRT3Q9NQL9 472 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 SLC22A7Q9Y694 548 aa16.57■□□□□ 0.24
TPM1-214ENST00000558544 MAP1BP46821 2468 aaKnown RBP16.57■□□□□ 0.24
TPM1-214ENST00000558544 CFAP47Q6ZTR5 3102 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 LRIT2A6NDA9 550 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 URADA6NGE7 173 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 RRP8O43159 456 aaKnown RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 TGFB1P01137 390 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 CHRNGP07510 517 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 ALOX12P18054 663 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 TCN2P20062 427 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 BGNP21810 368 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 FBLP22087 321 aaKnown RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 HMOX2P30519 316 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 PIK3CBP42338 1070 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 AVPR1BP47901 424 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 RAB8AP61006 207 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 RCN2Q14257 317 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 HERC3Q15034 1050 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 CHI3L2Q15782 390 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 SGO1Q5FBB7 561 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 PRMT9Q6P2P2 845 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 COX15Q7KZN9 410 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 MTERF4Q7Z6M4 381 aaKnown RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 PDSS2Q86YH6 399 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 METTL6Q8TCB7 284 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 GAL3ST3Q96A11 431 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 COL26A1Q96A83 441 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 MS4A6EQ96DS6 147 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 CNTNAP3BQ96NU0 1288 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 F2RL3Q96RI0 385 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 TRMOQ9BU70 441 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 CNTNAP3Q9BZ76 1288 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 SLC29A3Q9BZD2 475 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 REXO4Q9GZR2 422 aaKnown RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 ANKHQ9HCJ1 492 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 ZNF304Q9HCX3 659 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 TNFRSF12AQ9NP84 129 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 SLC22A11Q9NSA0 550 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 IFT80Q9P2H3 777 aaPredicted RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 ADGRE2Q9UHX3 823 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 CDC14AQ9UNH5 594 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 NAALAD2Q9Y3Q0 740 aa16.56■□□□□ 0.24
TPM1-214ENST00000558544 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
TPM1-214ENST00000558544 A0A0G2JN53 185 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 ZNF860A6NHJ4 632 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 MAGEB17A8MXT2 336 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 C9J4A7 227 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 SGK494L7N484 410 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 ERI3O43414 337 aaKnown RBP16.55■□□□□ 0.24
TPM1-214ENST00000558544 CRCPO75575 148 aa16.55■□□□□ 0.24
TPM1-214ENST00000558544 KLHL18O94889 574 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms