RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 STAT5AP42229 794 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 MRPS22P82650 360 aaKnown RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 ABHD18Q0P651 414 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 FASTKQ14296 549 aaKnown RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 IL11RAQ14626 422 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 LRRC36Q1X8D7 754 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 CNPY1Q3B7I2 92 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 C11orf91Q3C1V1 193 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 REP15Q6BDI9 236 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 C8orf82Q6P1X6 216 aaPredicted RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 PRMT9Q6P2P2 845 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 NEK10Q6ZWH5 1172 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 ARPINQ7Z6K5 226 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 RASGRP3Q8IV61 690 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 CPNE9Q8IYJ1 553 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 ALDH16A1Q8IZ83 802 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 PIAS4Q8N2W9 510 aaPredicted RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 EFCAB3Q8N7B9 438 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 OR4E2Q8NGC2 313 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 STAG3L4Q8TBR4 150 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 PTERQ96BW5 349 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 ROPN1LQ96C74 230 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 LINGO1Q96FE5 620 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 MED8Q96G25 268 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 FERD3LQ96RJ6 166 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 MRPS26Q9BYN8 205 aaKnown RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 IL17BQ9UHF5 180 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
TPM1-212ENST00000558347 TRAF6Q9Y4K3 522 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 HEBP2Q9Y5Z4 205 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 COLEC10Q9Y6Z7 277 aa9.88□□□□□ -0.83
TPM1-212ENST00000558347 TXNDC9O14530 226 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 CFLARO15519 480 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 KERAO60938 352 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 TNFAIP8O95379 198 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 FGF4P08620 206 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 FAM87AP0C7U9 286 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MPC1LP0DKB6 136 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SMIM18P0DKX4 95 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ITGB6P18564 788 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 F8A1P23610 371 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 NDUFS1P28331 727 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MRPL19P49406 292 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 PKNOX1P55347 436 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 HERVK_113P63132 956 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MS4A2Q01362 244 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MAP7Q14244 749 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 KRT33BQ14525 404 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 RBBP5Q15291 538 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 TLR1Q15399 786 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.87□□□□□ -0.83
TPM1-212ENST00000558347 SAMD4BQ5PRF9 694 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 ZNF678Q5SXM1 525 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 CYHR1Q6ZMK1 362 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 GK5Q6ZS86 529 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 PPP1R3BQ86XI6 285 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SPNS2Q8IVW8 549 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MYO1HQ8N1T3 1032 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ESX1Q8N693 406 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 TMEM102Q8N9M5 508 aaPredicted RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 OR52E1Q8NGJ3 308 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ASZ1Q8WWH4 475 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 LCN9Q8WX39 176 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SLC45A3Q96JT2 553 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 PPP1R36Q96LQ0 422 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ATOH8Q96SQ7 321 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 CD180Q99467 661 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 NPAS2Q99743 824 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ARHGAP9Q9BRR9 750 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 EFHD1Q9BUP0 239 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ERVK-6Q9BXR3 956 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 TRIT1Q9H3H1 467 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 ALG9Q9H6U8 611 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 GPN2Q9H9Y4 310 aaPredicted RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 SPAG4Q9NPE6 437 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 TMEM181Q9P2C4 612 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 CD300AQ9UGN4 299 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 MRPS18BQ9Y676 258 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 TENM4Q6N022 2769 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 TCRBV3S1A0A5B6 114 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SLC5A10A0PJK1 596 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SYCE1LA8MT33 242 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 ZNF891A8MT65 544 aaPredicted RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 TMEM233B4DJY2 109 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 IFRD1O00458 451 aaPredicted RBP9.87□□□□□ -0.83
TPM1-212ENST00000558347 BTN3A3O00478 584 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 BTN3A1O00481 513 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 NKX2-8O15522 239 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 VPS4BO75351 444 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SLCO2B1O94956 709 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 STAMBPO95630 424 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 GSTT1P30711 240 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 SLC7A1P30825 629 aa9.87□□□□□ -0.83
TPM1-212ENST00000558347 RPL5P46777 297 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms