RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 VSX2P58304 361 aaPredicted RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 UBAP2LQ14157 1087 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 DEFB110Q30KQ9 67 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 PDCD4Q53EL6 469 aaKnown RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 TCTE1Q5JU00 501 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 STPG1Q5TH74 334 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 GALNT18Q6P9A2 607 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 CYP20A1Q6UW02 462 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 ABHD13Q7L211 337 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 COMMD6Q7Z4G1 85 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 NUDT13Q86X67 352 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 OR4N4Q8N0Y3 316 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 D2HGDHQ8N465 521 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 MS4A6EQ96DS6 147 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 KCNC2Q96PR1 638 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 CCDC106Q9BWC9 280 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 ROGDIQ9GZN7 287 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 FANCEQ9HB96 536 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 SDR39U1Q9NRG7 319 aaPredicted RBP16.08■□□□□ 0.16
SNX1-203ENST00000558040 TMEM45AQ9NWC5 275 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 ARMCX1Q9P291 453 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 MCM8Q9UJA3 840 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 ADAM29Q9UKF5 820 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 GPR45Q9Y5Y3 372 aa16.08■□□□□ 0.16
SNX1-203ENST00000558040 A0A088AWK7 358 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 IGHV5-10-1A0A0J9YXX1 117 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 GNG14A0A1W2PPG7 69 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 ARHGAP10A1A4S6 786 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 A8MU76 341 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 PSMD12O00232 456 aaPredicted RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 ERI3O43414 337 aaKnown RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 PCDH7O60245 1069 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 STATHP02808 62 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 MSL3P1P0C860 447 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 G6PDP11413 515 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 BCKDHAP12694 445 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 ZNF10P21506 573 aaPredicted RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 SSR2P43308 183 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 E2F1Q01094 437 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 HYAL2Q12891 473 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 TRA2AQ13595 282 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■■□□□ 12.9
SNX1-203ENST00000558040 C6orf89Q6UWU4 347 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 ZNF574Q6ZN55 896 aaPredicted RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 LIX1Q8N485 282 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 C11orf24Q96F05 449 aaPredicted RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 CCDC74BQ96LY2 380 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 TBCDQ9BTW9 1192 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 EBPLQ9BY08 206 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 SYNPO2LQ9H987 977 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 COPS7BQ9H9Q2 264 aaPredicted RBP16.07■□□□□ 0.16
SNX1-203ENST00000558040 IRAK4Q9NWZ3 460 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 ZIM2Q9NZV7 527 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 MAPRE3Q9UPY8 281 aa16.07■□□□□ 0.16
SNX1-203ENST00000558040 USP34Q70CQ2 3546 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 P2RX6O15547 441 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 GDF9O60383 454 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 RFPL3O75679 317 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ANXA4P09525 319 aaPredicted RBP16.06■□□□□ 0.16
SNX1-203ENST00000558040 SDC1P18827 310 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 GSTM5P46439 218 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ASMTP46597 345 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 GABRA4P48169 554 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 LIMK1P53667 647 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 PLA2G16P53816 162 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ZNF763Q0D2J5 394 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 KLF10Q13118 480 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 KRT72Q14CN4 511 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 MAPRE2Q15555 327 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 NDUFA9Q16795 377 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 WASHC2DQ5SRD0 308 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 OR4C11Q6IEV9 310 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ABHD17CQ6PCB6 329 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 TMPRSS9Q7Z410 1059 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ARHGAP22Q7Z5H3 698 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 PIP4P1Q86T03 277 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ZNF285Q96NJ3 590 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 ZBTB18Q99592 522 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 MACROD1Q9BQ69 325 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 C17orf62Q9BQA9 187 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 KLHL31Q9H511 634 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 DLGAP4Q9Y2H0 992 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 RP1P56715 2156 aa16.06■□□□□ 0.16
SNX1-203ENST00000558040 CASC3O15234 703 aaKnown RBP16.05■□□□□ 0.16
SNX1-203ENST00000558040 SLC22A3O75751 556 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 KLK1P06870 262 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 ZNF888P0CJ79 500 aaPredicted RBP16.05■□□□□ 0.16
SNX1-203ENST00000558040 GPX3P22352 226 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 PIK3R1P27986 724 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 PRDX6P30041 224 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 BSGP35613 385 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 RAE1P78406 368 aaKnown RBP16.05■□□□□ 0.16
SNX1-203ENST00000558040 ACY1Q03154 408 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 KCNAB1Q14722 419 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 ZSCAN26Q16670 478 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 HKDC1Q2TB90 917 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 CCNYL2Q5T2Q4 361 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 PHF19Q5T6S3 580 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 TMEM214Q6NUQ4 689 aaKnown RBP16.05■□□□□ 0.16
SNX1-203ENST00000558040 CYB5D1Q6P9G0 228 aa16.05■□□□□ 0.16
SNX1-203ENST00000558040 RBM44Q6ZP01 1051 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms