RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR1C1Q15619 314 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 FCRLBQ6BAA4 426 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 XKRXQ6PP77 449 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 RPS19BP1Q86WX3 136 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 CYP4X1Q8N118 509 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 ZNF808Q8N4W9 903 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 NT5CQ8TCD5 201 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 NEIL2Q969S2 332 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 VPS39Q96JC1 886 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 PTCHD1Q96NR3 888 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 LANCL2Q9NS86 450 aa12.8□□□□□ -0.36
SNRPA1-204ENST00000558020 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 FAM227AF5H4B4 570 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC19A2O60779 497 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 B4GALT2O60909 372 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 BANF1O75531 89 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 ZNF888P0CJ79 500 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SAT1P21673 171 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SCTRP47872 440 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SMSP52788 366 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC26A5P58743 744 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 DR1Q01658 176 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 FRG1Q14331 258 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 RBBP5Q15291 538 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 CATSPEREQ5SY80 951 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 SPINK14Q6IE38 97 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 THOC6Q86W42 341 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 IGDCC3Q8IVU1 814 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 MDS2Q8NDY4 140 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 OR5T3Q8NGG3 340 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 OR4K3Q96R72 315 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 EGFL8Q99944 293 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 PELI2Q9HAT8 420 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 KLHL1Q9NR64 748 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 NSMCE4AQ9NXX6 385 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 LRFN1Q9P244 771 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 CHMP2BQ9UQN3 213 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 TEX264Q9Y6I9 313 aa12.79□□□□□ -0.36
SNRPA1-204ENST00000558020 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SP1P08047 785 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SERPINA6P08185 405 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 GNAZP19086 355 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 IVDP26440 423 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 CYB561P49447 251 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC12A2P55011 1212 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 STXBP1P61764 594 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 MGAT5Q09328 741 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 MAPKAPK3Q16644 382 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 ZXDCQ2QGD7 858 aaPredicted RBP12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC25A25Q6KCM7 469 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 NXPE4Q6UWF7 544 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 QSOX2Q6ZRP7 698 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 FRA10AC1Q70Z53 315 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SRRM1Q8IYB3 904 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 TTLQ8NG68 377 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 UTP15Q8TED0 518 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 CCDC120Q96HB5 630 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 FAR2Q96K12 515 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 TSNARE1Q96NA8 513 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SIGLEC12Q96PQ1 595 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 RBCK1Q9BYM8 510 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 CDCP1Q9H5V8 836 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 TRMT1Q9NXH9 659 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 ANKRD10Q9NXR5 420 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 SLC22A14Q9Y267 594 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 CROCCQ5TZA2 2017 aa12.78□□□□□ -0.36
SNRPA1-204ENST00000558020 A0A088AWK7 358 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 FCHO1O14526 889 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 ZNF37AP17032 561 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 AGAP20933 346 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 GSTM2P28161 218 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 TNFRSF8P28908 595 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 HNF4AP41235 474 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 PAFAH1B1P43034 410 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 RAB8AP61006 207 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 OLR1P78380 273 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 CDKL1Q00532 357 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 PMP22Q01453 160 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 STEAP4Q687X5 459 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 SBSNQ6UWP8 590 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 ADAMTSL2Q86TH1 951 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 SPPL2CQ8IUH8 684 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 EID3Q8N140 333 aa12.77□□□□□ -0.37
SNRPA1-204ENST00000558020 ELP5Q8TE02 316 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms