RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 FBLP22087 321 aaKnown RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 PTPN4P29074 926 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 SERPINB1P30740 379 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 NAA20P61599 178 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 LCP2Q13094 533 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 HERC3Q15034 1050 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 ZRSR2Q15696 482 aaKnown RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 COX15Q7KZN9 410 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 OVCH1Q7RTY7 1134 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 PRSS41Q7RTY9 318 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 AFAP1L2Q8N4X5 818 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 UTP15Q8TED0 518 aaKnown RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF473Q8WTR7 871 aaKnown RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 SLC45A3Q96JT2 553 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 MAGEB10Q96LZ2 347 aaPredicted RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF382Q96SR6 550 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 ADGRE2Q9UHX3 823 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 STK38LQ9Y2H1 464 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 USP24Q9UPU5 2620 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 FER1L5A0AVI2 2057 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 UQCRHLA0A096LP55 91 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 LRIT2A6NDA9 550 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 TRIM13O60858 407 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 TBX6O95947 436 aaPredicted RBP24.25■■□□□ 1.47
SMAD6-202ENST00000557916 UQCRHP07919 91 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 ALOX12P18054 663 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 ALDH3A1P30838 453 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 TMPRSS3P57727 454 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 ASPHQ12797 758 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 DDX39BQ13838 428 aaKnown RBP24.25■■□□□ 1.47
SMAD6-202ENST00000557916 DSG2Q14126 1118 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 GGTA1PQ4G0N0 100 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 MRPL14Q6P1L8 145 aaKnown RBP24.25■■□□□ 1.47
SMAD6-202ENST00000557916 HUS1BQ8NHY5 278 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 FKBP10Q96AY3 582 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 AICDAQ9GZX7 198 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 ACTL8Q9H568 366 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 CPNE5Q9HCH3 593 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 NAALAD2Q9Y3Q0 740 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 TSC22D4Q9Y3Q8 395 aa24.25■■□□□ 1.47
SMAD6-202ENST00000557916 H0YIG0 161 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 TM9SF1O15321 606 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 KLHL18O94889 574 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 OR4F21O95013 312 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 CD63P08962 238 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 HNRNPH1P31943 449 aaKnown RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 HPDP32754 393 aaPredicted RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 PIK3CBP42338 1070 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 ETV4P43268 484 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 RAB8AP61006 207 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 MAGOHP61326 146 aaKnown RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 RPS18P62269 152 aaKnown RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 DEFB134Q4QY38 66 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 TTC19Q6DKK2 380 aaPredicted RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 LETMD1Q6P1Q0 360 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 PDSS2Q86YH6 399 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 ZSCAN1Q8NBB4 408 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 STARD8Q92502 1023 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 TLCD1Q96CP7 247 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 MS4A6EQ96DS6 147 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 MTERF1Q99551 399 aaKnown RBP24.24■■□□□ 1.47
SMAD6-202ENST00000557916 MECRQ9BV79 373 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 TRPS1Q9UHF7 1281 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF225Q9UK10 706 aa24.24■■□□□ 1.47
SMAD6-202ENST00000557916 SGK494L7N484 410 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 FFAR3O14843 346 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 GPR42O15529 346 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 ALBP02768 609 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 PHEXP78562 749 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 MPP2Q14168 576 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 ADPRMQ3LIE5 342 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 FRMD7Q6ZUT3 714 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 GPRIN3Q6ZVF9 776 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 SYVN1Q86TM6 617 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 RNF175Q8N4F7 328 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 AMER3Q8N944 861 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 WDR20Q8TBZ3 569 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 GAL3ST3Q96A11 431 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 YIPF2Q9BWQ6 316 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 GATA5Q9BWX5 397 aaPredicted RBP24.23■■□□□ 1.47
SMAD6-202ENST00000557916 MS4A8Q9BY19 250 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 REXO4Q9GZR2 422 aaKnown RBP24.23■■□□□ 1.47
SMAD6-202ENST00000557916 TRPC4Q9UBN4 977 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 TCFL5Q9UL49 500 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 PADI2Q9Y2J8 665 aa24.23■■□□□ 1.47
SMAD6-202ENST00000557916 GALR3O60755 368 aaPredicted RBP24.22■■□□□ 1.47
SMAD6-202ENST00000557916 CNOT3O75175 753 aaKnown RBP24.22■■□□□ 1.47
SMAD6-202ENST00000557916 CREG1O75629 220 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 ZWINTO95229 277 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 B3GALT4O96024 378 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 TGFB1P01137 390 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 SMIM10L1P0DMW3 83 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 NEK2P51955 445 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 PKNOX1P55347 436 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 SKP1P63208 163 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 AGBL2Q5U5Z8 902 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 NIPAL1Q6NVV3 410 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 SREK1Q8WXA9 508 aaKnown RBP24.22■■□□□ 1.47
SMAD6-202ENST00000557916 ARL8AQ96BM9 186 aa24.22■■□□□ 1.47
SMAD6-202ENST00000557916 MTFMTQ96DP5 389 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms