RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SPHK1Q9NYA1 384 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 STX18Q9P2W9 335 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 FBXL21Q9UKT6 434 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 PCOLCE2Q9UKZ9 415 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 EXO1Q9UQ84 846 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 DMTF1Q9Y222 760 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 INVSQ9Y283 1065 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 MRPS17Q9Y2R5 130 aaKnown RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.07□□□□□ -1.28
SPG11-204ENST00000557866 TMED5Q9Y3A6 229 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 TSC22D4Q9Y3Q8 395 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 DGKBQ9Y6T7 804 aa7.07□□□□□ -1.28
SPG11-204ENST00000557866 DOCK9Q9BZ29 2069 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TRBV23OR9-2A0A075B6M9 112 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TRBV5-3A0A0A0MS03 114 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 A0A1W2PR77 199 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 FEZF1A0PJY2 475 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 DYTNA2CJ06 578 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZNF839A8K0R7 811 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 H7BY64 318 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SAP18O00422 153 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 TOR1BO14657 336 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 YY2O15391 372 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 AKAP10O43572 662 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 LCMT2O60294 686 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 DFNA5O60443 496 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZNF217O75362 1048 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TGFB1P01137 390 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TNFP01375 233 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 WNT1P04628 370 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PGRP06401 933 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 THEGLP0DJG4 465 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ANPEPP15144 967 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 HOXB9P17482 250 aaPredicted RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 GCKP35557 465 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ACTR1BP42025 376 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PIK3CBP42338 1070 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GSK3BP49841 420 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 CCR8P51685 355 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 C21orf58P58505 322 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ACTR1AP61163 376 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 CSNK1G2P78368 415 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PLIN5Q00G26 463 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 MTAPQ13126 283 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PWP1Q13610 501 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 KRT33BQ14525 404 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 UGT8Q16880 541 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GTDC1Q4AE62 458 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZNF542PQ5EBM4 170 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PAGE2BQ5JRK9 111 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SAMD4BQ5PRF9 694 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 ICE2Q659A1 982 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 NANOGP8Q6NSW7 305 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PRMT9Q6P2P2 845 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 AAGABQ6PD74 315 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TMIGD1Q6UXZ0 262 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 DHDDSQ86SQ9 333 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZDHHC13Q8IUH4 622 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GALNT12Q8IXK2 581 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 METTL4Q8N3J2 472 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GPR156Q8NFN8 814 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 OR7A2PQ8NGA2 310 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 OR2A1Q8NGT9 310 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPG11-204ENST00000557866 DNAJB14Q8TBM8 379 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GPBAR1Q8TDU6 330 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SLC26A7Q8TE54 656 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SLC13A3Q8WWT9 602 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 JADE3Q92613 823 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 GFM2Q969S9 779 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 SH3KBP1Q96B97 665 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TESCQ96BS2 214 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 REPS1Q96D71 796 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SHDQ96IW2 340 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 METTL2AQ96IZ6 378 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 PRAP1Q96NZ9 151 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 NELL2Q99435 816 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZBTB18Q99592 522 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 CGREF1Q99674 301 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 INPP5KQ9BT40 448 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 TWSG1Q9GZX9 223 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 PAIP1Q9H074 479 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 SYNPO2LQ9H987 977 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 NANOGQ9H9S0 305 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SLC6A20Q9NP91 592 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SERHLQ9NQF3 203 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SLC6A13Q9NSD5 602 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SIRT5Q9NXA8 310 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SLC25A37Q9NYZ2 338 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 SUCOQ9UBS9 1254 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 USP22Q9UPT9 525 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ERVK-11Q9UQG0 969 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 RUVBL1Q9Y265 456 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 MAN2B2Q9Y2E5 1009 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 BTBD3Q9Y2F9 522 aa7.06□□□□□ -1.28
SPG11-204ENST00000557866 ZFC3H1O60293 1989 aaKnown RBP7.06□□□□□ -1.28
SPG11-204ENST00000557866 TRIOO75962 3097 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 A0A096LPE4 126 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms