RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 SGK494L7N484 410 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 DLX3O60479 287 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 UGDHO60701 494 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 RDH16O75452 317 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CLEC3AO75596 197 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 RECKO95980 971 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 PROCP04070 461 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ITGB2P05107 769 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 SERPINA6P08185 405 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 MYL2P10916 166 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ALOX12P18054 663 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ATP5F1P24539 256 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 HNRNPH1P31943 449 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CRHR1P34998 444 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CASP2P42575 452 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CCNG1P51959 295 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 RAB8AP61006 207 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 STXBP1P61764 594 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 HERVK_113P63132 956 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 HYAL2Q12891 473 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 DDX39BQ13838 428 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 E2F2Q14209 437 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 RBBP7Q16576 425 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 SYT16Q17RD7 645 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CCDC153Q494R4 210 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 DEFB134Q4QY38 66 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 BORAQ6PGQ7 559 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 RPS27LQ71UM5 84 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 PDSS2Q86YH6 399 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 SLC22A9Q8IVM8 553 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 OR52B6Q8NGF0 335 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 STT3BQ8TCJ2 826 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CREB3L4Q8TEY5 395 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 PPP4R1Q8TF05 950 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ZNF483Q8TF39 744 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 EXTL1Q92935 676 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 MIEF2Q96C03 454 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ZIM3Q96PE6 472 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 CDK15Q96Q40 435 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 SPSB2Q99619 263 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 TMEM109Q9BVC6 243 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 HCN3Q9P1Z3 774 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 GRID1Q9ULK0 1009 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 ZNF490Q9ULM2 529 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 MAN2B2Q9Y2E5 1009 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 COL6A6A6NMZ7 2263 aa10.04□□□□□ -0.8
HNRNPC-232ENST00000557442 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 C4orf51C9J302 202 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 OR7A17O14581 309 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 RGS16O15492 202 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ERI3O43414 337 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 PLIN3O60664 434 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 GALR3O60755 368 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 SUPT7LO94864 414 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CLDN9O95484 217 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 B3GALT4O96024 378 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 UMODP07911 640 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ZGLP1P0C6A0 271 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 TSPAN8P19075 237 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 SERPINB1P30740 379 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 HPDP32754 393 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CDH13P55290 713 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 OLR1P78380 273 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 PHEXP78562 749 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 SLC18A2Q05940 514 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 KLC1Q07866 573 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 PCDH1Q08174 1060 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 TRAF3Q13114 568 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CPSF6Q16630 551 aaKnown RBP eCLIP10.03□□□□□ -0.83e-7■■■□□ 15.6
HNRNPC-232ENST00000557442 TBR1Q16650 682 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 VWA2Q5GFL6 755 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ZNF678Q5SXM1 525 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 LIPJQ5W064 366 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 NIPAL1Q6NVV3 410 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 TRIM40Q6P9F5 258 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ZYG11AQ6WRX3 759 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 VN1R5Q7Z5H4 357 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 MRGPREQ86SM8 312 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 AFAP1L2Q8N4X5 818 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 OR7G3Q8NG95 312 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 RDH11Q8TC12 318 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ADAMTS17Q8TE56 1095 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 UTP15Q8TED0 518 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 THAP4Q8WY91 577 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 TTC9Q92623 222 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 GAL3ST3Q96A11 431 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ZBTB9Q96C00 473 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 REPS1Q96D71 796 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CCDC126Q96EE4 140 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 SMC6Q96SB8 1091 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ARHGAP9Q9BRR9 750 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms