RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TSSK3Q96PN8 268 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 GBP5Q96PP8 586 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PRPF18Q99633 342 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 CPPED1Q9BRF8 314 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 THUMPD3Q9BV44 507 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 VCXQ9H320 206 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 Q9H521 79 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 KAT8Q9H7Z6 458 aaKnown RBP7.96□□□□□ -1.14
ATXN3-235ENST00000556082 DMRT3Q9NQL9 472 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 SLC2A4RGQ9NR83 387 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 AGPAT4Q9NRZ5 378 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 TM7SF3Q9NS93 570 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 AHSPQ9NZD4 102 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 EGFL7Q9UHF1 273 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ATP6V1HQ9UI12 483 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ANAPC2Q9UJX6 822 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 RAB26Q9ULW5 256 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 PCDHB14Q9Y5E9 798 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 HEBP2Q9Y5Z4 205 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 HS3ST3A1Q9Y663 406 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 LRRK1Q38SD2 2015 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 ANKRD12Q6UB98 2062 aa7.96□□□□□ -1.14
ATXN3-235ENST00000556082 A0A1W2PPC1 479 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 A0A1W2PPV9 198 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ELOVL7A1L3X0 281 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 MAGEA13PA6NCF6 341 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 LRRC72A6NJI9 287 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 FAM220BPB1ANY3 271 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SCAMP2O15127 329 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 LATO43561 262 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 KDM1AO60341 852 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 TBX19O60806 448 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GMNNO75496 209 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 RETP07949 1114 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ANXA6P08133 673 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ABCB1P08183 1280 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ACADMP11310 421 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 PCNAP12004 261 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CDH1P12830 882 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ACP5P13686 325 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GPX2P18283 190 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 FASP25445 335 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GSTM2P28161 218 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SSTR4P31391 388 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 HPCAL1P37235 193 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GSTM5P46439 218 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 RAB28P51157 221 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ARFIP1P53367 373 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ATXN3P54252 364 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 POLE2P56282 527 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 OR4D2P58180 307 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 MTPNP58546 118 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 YPEL5P62699 121 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ABATP80404 500 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ABHD18Q0P651 414 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 PDE7AQ13946 482 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SELPLGQ14242 412 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ATP6AP1Q15904 470 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CYP51A1Q16850 503 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 UGT8Q16880 541 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 PGS1Q32NB8 556 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GRAMD1BQ3KR37 738 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 INTS11Q5TA45 600 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CPTPQ5TA50 214 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 IKBIPQ70UQ0 350 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ARMCX6Q7L4S7 300 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 R3HCC1LQ7Z5L2 792 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SERPINA11Q86U17 422 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 IFNEQ86WN2 208 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 C17orf64Q86WR6 236 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 APLFQ8IW19 511 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 FAM20CQ8IXL6 584 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 C1orf52Q8N6N3 182 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 NATD1Q8N6N6 113 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF548Q8NEK5 533 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 OR2T12Q8NG77 320 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 OR2L8Q8NGY9 312 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 GOT1L1Q8NHS2 421 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CLHC1Q8NHS4 586 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 LRTOMTQ8WZ04 291 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 NELL1Q92832 810 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ERLEC1Q96DZ1 483 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CENPNQ96H22 339 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 REXO5Q96IC2 774 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 EGLN2Q96KS0 407 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 ZNF597Q96LX8 424 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 NSMCE2Q96MF7 247 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 CAMK1GQ96NX5 476 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 FERD3LQ96RJ6 166 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 AIF1LQ9BQI0 150 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 SPATA9Q9BWV2 254 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 BHLHE41Q9C0J9 482 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 TWSG1Q9GZX9 223 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 TTYH1Q9H313 450 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 RPF2Q9H7B2 306 aaKnown RBP7.95□□□□□ -1.14
ATXN3-235ENST00000556082 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
ATXN3-235ENST00000556082 MYNNQ9NPC7 610 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms