RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TOR1AIP1Q5JTV8 583 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 TMEM214Q6NUQ4 689 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 C6orf15Q6UXA7 325 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 TTLL10Q6ZVT0 673 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 NLGN4XQ8N0W4 816 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 ANKRD53Q8N9V6 530 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 NLGN4YQ8NFZ3 816 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 OR2L5Q8NG80 312 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 OR6Y1Q8NGX8 325 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 CREB3L4Q8TEY5 395 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 FGF11Q92914 225 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 MR1Q95460 341 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 GAL3ST3Q96A11 431 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 RGMAQ96B86 450 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 QRFPRQ96P65 431 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 MTERF1Q99551 399 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 CCT7Q99832 543 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 TBCDQ9BTW9 1192 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 TMEM121BQ9BXQ6 578 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 MS4A8Q9BY19 250 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 FAM117AQ9C073 453 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 SLC6A16Q9GZN6 736 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 REXO4Q9GZR2 422 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 CCDC86Q9H6F5 360 aaKnown RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 COPS7BQ9H9Q2 264 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 BRF2Q9HAW0 419 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 ASCL3Q9NQ33 180 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 DMRT3Q9NQL9 472 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 STARD5Q9NSY2 213 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 DKK4Q9UBT3 224 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 GPN3Q9UHW5 284 aaPredicted RBP7.27□□□□□ -1.25
TDP1-214ENST00000556063 RAP2CQ9Y3L5 183 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 TRAF6Q9Y4K3 522 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 LAMA1P25391 3075 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 BPTFQ12830 3046 aa7.27□□□□□ -1.25
TDP1-214ENST00000556063 SDK2Q58EX2 2172 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 MED19A0JLT2 244 aaPredicted RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 PMS2P1A4D2B8 440 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 MAGEB17A8MXT2 336 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SLCO1B7G3V0H7 640 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 H0YIG0 161 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 H3BMH7 237 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SLC28A1O00337 649 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 UBFD1O14562 309 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 P2RX6O15547 441 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ERI3O43414 337 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 RGS14O43566 566 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 B3GALT2O43825 422 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 RAD1O60671 282 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 KLHL18O94889 574 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 TIAF1O95411 115 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 NSA2O95478 260 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 DLGAP3O95886 979 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 TGFB1P01137 390 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 STATHP02808 62 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 CHRNGP07510 517 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 LIPCP11150 499 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 TSFMP43897 325 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 RPL14P50914 215 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 NEK2P51955 445 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 HK2P52789 917 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 MTTPP55157 894 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 RPS13P62277 151 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 ADPRMQ3LIE5 342 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 NKAIN1Q4KMZ8 207 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SH2D4BQ5SQS7 431 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 DEPDC1Q5TB30 811 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ARHGAP40Q5TG30 622 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 KHDRBS2Q5VWX1 349 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 PAGE2Q7Z2X7 111 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 CRLF3Q8IUI8 442 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 CACNA2D3Q8IZS8 1091 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 IL22RA1Q8N6P7 574 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 KCT2Q8NC54 265 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 GALNT6Q8NCL4 622 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ZNF248Q8NDW4 579 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ZCCHC10Q8TBK6 192 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 WDR20Q8TBZ3 569 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ZNF75CPQ92670 426 aaPredicted RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 MARVELD3Q96A59 401 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 COL26A1Q96A83 441 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 KIAA1143Q96AT1 154 aaPredicted RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 MTFMTQ96DP5 389 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 MS4A6EQ96DS6 147 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 MOCOSQ96EN8 888 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 MAGEB18Q96M61 343 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 KCNC2Q96PR1 638 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 EFHD1Q9BUP0 239 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SHCBP1LQ9BZQ2 653 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 OR51B5Q9H339 312 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ZNF304Q9HCX3 659 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 RIC8BQ9NVN3 520 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 FOXJ2Q9P0K8 574 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 DHCR7Q9UBM7 475 aaKnown RBP7.26□□□□□ -1.25
TDP1-214ENST00000556063 VPS29Q9UBQ0 182 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 ZNF225Q9UK10 706 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SLC12A4Q9UP95 1085 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 PADI2Q9Y2J8 665 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 FIS1Q9Y3D6 152 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms