RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	CUL3	Q13618	768 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	CACHD1	Q5VU97	1274 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	METTL21C	Q5VZV1	264 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	IGF2-AS	Q6U949	168 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	CCDC81	Q6ZN84	652 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907		Q6ZSR9	355 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	FAM92B	Q6ZTR7	304 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	MAVS	Q7Z434	540 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	SPATA21	Q7Z572	469 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	VN1R5	Q7Z5H4	357 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	TRIM73	Q86UV7	250 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	MYLK4	Q86YV6	388 aa	Predicted RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	PARP9	Q8IXQ6	854 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	D2HGDH	Q8N465	521 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	ANKS4B	Q8N8V4	417 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	C19orf47	Q8N9M1	422 aa	Known RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	RFWD2	Q8NHY2	731 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	HUS1B	Q8NHY5	278 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	AGR3	Q8TD06	166 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	CREB3L4	Q8TEY5	395 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	WBP1	Q96G27	269 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	LIN37	Q96GY3	246 aa	Predicted RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	PPM1M	Q96MI6	270 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	ZNF285	Q96NJ3	590 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	TMEM74	Q96NL1	305 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	TGM7	Q96PF1	710 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	NUDT22	Q9BRQ3	303 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	CCDC28B	Q9BUN5	200 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	STRADB	Q9C0K7	418 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	ZNF768	Q9H5H4	540 aa	Known RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	NPHS2	Q9NP85	383 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	RIC8B	Q9NVN3	520 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	NMRK1	Q9NWW6	199 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	SIRT5	Q9NXA8	310 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	MARCO	Q9UEW3	520 aa	Predicted RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	PCDHGA4	Q9Y5G9	962 aa		10.8	□□□□□ -0.68
RAD51B-222	ENST00000555907	SNRNP200	O75643	2136 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	IGHV5-10-1	A0A0J9YXX1	117 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PIP5K1B	O14986	540 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	RGS14	O43566	566 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	KIF1C	O43896	1103 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	TBX6	O95947	436 aa	Predicted RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	SERPINA6	P08185	405 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PRR35	P0CG20	571 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	THRA	P10827	490 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PVR	P15151	417 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	NELFE	P18615	380 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	BCL6	P41182	706 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	HTR6	P50406	440 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	NEK2	P51955	445 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	ARFIP2	P53365	341 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	IRX1	P78414	480 aa	Predicted RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PHEX	P78562	749 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	HSD11B2	P80365	405 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	MEF2A	Q02078	507 aa	Predicted RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	RBBP5	Q15291	538 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	ADPRM	Q3LIE5	342 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	TCHHL1	Q5QJ38	904 aa	Predicted RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	DEPDC1	Q5TB30	811 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	RAB11FIP2	Q7L804	512 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	ADCK2	Q7Z695	626 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	MCAT	Q8IVS2	390 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	SLITRK4	Q8IW52	837 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	CEP70	Q8NHQ1	597 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	NT5C	Q8TCD5	201 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	CCT6B	Q92526	530 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	C19orf60	Q96EN9	201 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	CMTM7	Q96FZ5	175 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	C3orf30	Q96M34	536 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	SERPINI1	Q99574	410 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	ZFYVE21	Q9BQ24	234 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	MS4A8	Q9BY19	250 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	NUF2	Q9BZD4	464 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	DPH1	Q9BZG8	443 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	FAM60A	Q9NP50	221 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PDE7B	Q9NP56	450 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	FARSB	Q9NSD9	589 aa	Known RBP	10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	IL17B	Q9UHF5	180 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	DCTN4	Q9UJW0	460 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	PLCL2	Q9UPR0	1127 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	KLHL20	Q9Y2M5	609 aa		10.79	□□□□□ -0.68
RAD51B-222	ENST00000555907	FEZF1	A0PJY2	475 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	MAGEB17	A8MXT2	336 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	CDRT15L2	A8MXV6	281 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907		K7ENP7	123 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	TXNDC9	O14530	226 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	PLD2	O14939	933 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	RSL1D1	O76021	490 aa	Known RBP	10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	SEMA3D	O95025	777 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	JUN	P05412	331 aa	Known RBP	10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	LINC00032	P0C843	101 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	CCKBR	P32239	447 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	EMP3	P54852	163 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	SRSF6	Q13247	344 aa	Known RBP	10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	EIF3I	Q13347	325 aa	Known RBP	10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	TUBB3	Q13509	450 aa		10.78	□□□□□ -0.68
RAD51B-222	ENST00000555907	KIAA0040	Q15053	153 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms