RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 GSTO2Q9H4Y5 243 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 SEMA4BQ9NPR2 832 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-215ENST00000555616 SLC22A11Q9NSA0 550 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 CUTCQ9NTM9 273 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 TAC3Q9UHF0 121 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-215ENST00000555616 DYRK1BQ9Y463 629 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 HEMK1Q9Y5R4 338 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-215ENST00000555616 KCNE2Q9Y6J6 123 aa9.18□□□□□ -0.94
ACTN1-215ENST00000555616 LRRC14BA6NHZ5 514 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 J3QKU1 62 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CLGNO14967 610 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 DSCR3O14972 297 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 SLC28A2O43868 658 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CNOT3O75175 753 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CRCPO75575 148 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CEACAM4O75871 244 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 DNAJB5O75953 348 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CD63P08962 238 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 EZRP15311 586 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 GNAZP19086 355 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 FOLR3P41439 243 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 GDF5P43026 501 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CCNG1P51959 295 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 CDH13P55290 713 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PKNOX1P55347 436 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 YBX1P67809 324 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ABATP80404 500 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 OCRLQ01968 901 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 RELAQ04206 551 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PRDX1Q06830 199 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ARL13AQ5H913 290 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PRAMEF13Q5VWM6 474 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ICE2Q659A1 982 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 TCTN3Q6NUS6 607 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 MRPL14Q6P1L8 145 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 SUSD1Q6UWL2 747 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ATG14Q6ZNE5 492 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 FAM47EQ6ZV65 393 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 GPRIN3Q6ZVF9 776 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 TTLL10Q6ZVT0 673 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PRICKLE2Q7Z3G6 844 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 GOLGA7Q7Z5G4 137 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 RAB43Q86YS6 212 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 TTC29Q8NA56 475 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PPFIBP2Q8ND30 876 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 OR2Y1Q8NGV0 311 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 TRPC4APQ8TEL6 797 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 COL26A1Q96A83 441 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PYCR2Q96C36 320 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 IP6K3Q96PC2 410 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ZNF382Q96SR6 550 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PLCD4Q9BRC7 762 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ACAT2Q9BWD1 397 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 SLC26A1Q9H2B4 701 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 NOL11Q9H8H0 719 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 IPPKQ9H8X2 491 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 WDR54Q9H977 334 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 MRPS30Q9NP92 439 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ZNF71Q9NQZ8 489 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 GPRC5BQ9NZH0 403 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 IFT80Q9P2H3 777 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 NDOR1Q9UHB4 597 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 SLC22A14Q9Y267 594 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 TP53TG5Q9Y2B4 290 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 RAP2CQ9Y3L5 183 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 ASB1Q9Y576 335 aa9.17□□□□□ -0.94
ACTN1-215ENST00000555616 PCDHGA9Q9Y5G4 932 aaKnown RBP9.17□□□□□ -0.94
ACTN1-215ENST00000555616 BSNQ9UPA5 3926 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
ACTN1-215ENST00000555616 LOC105369274A0A096LPK9 316 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 LOC102723532A0A0G2JNH3 316 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 A0A0J9YVX5 310 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 ARGFXA6NJG6 315 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 ITM2AO43736 263 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 EDF1O60869 148 aaKnown RBP9.16□□□□□ -0.94
ACTN1-215ENST00000555616 LYPLA1O75608 230 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-215ENST00000555616 MED26O95402 600 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 CLDN9O95484 217 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 FAM107AO95990 144 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 ALBP02768 609 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 CHRNGP07510 517 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 UMODP07911 640 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 HK2P52789 917 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 EMP3P54852 163 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 VSX2P58304 361 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-215ENST00000555616 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 ATP1A4Q13733 1029 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 SLC9A5Q14940 896 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 ZXDCQ2QGD7 858 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-215ENST00000555616 PRTGQ2VWP7 1150 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 FAM214AQ32MH5 1076 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 WASHC2DQ5SRD0 308 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 LCTLQ6UWM7 567 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 COX15Q7KZN9 410 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 CPLX4Q7Z7G2 160 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 CUZD1Q86UP6 607 aa9.16□□□□□ -0.94
ACTN1-215ENST00000555616 C17orf64Q86WR6 236 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms