RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 XPR1Q9UBH6 696 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 MKL2Q9ULH7 1088 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 TP53TG5Q9Y2B4 290 aa11.47□□□□□ -0.57
SRP54-206ENST00000555317 HELZ2Q9BYK8 2649 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 IGLV3-12A0A075B6K2 115 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PSMD12O00232 456 aaPredicted RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 C1QL1O75973 258 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ALPPP05187 535 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 UQCRHP07919 91 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PCNAP12004 261 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ITGA3P26006 1051 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PHEXP78562 749 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 AIMP2Q13155 320 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 DOC2AQ14183 400 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 TBCCQ15814 346 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 SYT16Q17RD7 645 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 TECRLQ5HYJ1 363 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 TCTN3Q6NUS6 607 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ASB18Q6ZVZ8 466 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PRSS41Q7RTY9 318 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 LCA5Q86VQ0 697 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ZC3H7AQ8IWR0 971 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 PLD6Q8N2A8 252 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 GALNT16Q8N428 558 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PTGR2Q8N8N7 351 aaPredicted RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 ATP6V1E2Q96A05 226 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 GAL3ST3Q96A11 431 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 MOCOSQ96EN8 888 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 GPR78Q96P69 363 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 TGIF2Q9GZN2 237 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 MRPL46Q9H2W6 279 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 NT5DC2Q9H857 520 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ANKZF1Q9H8Y5 726 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 ACTR8Q9H981 624 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 C19orf25Q9UFG5 118 aaPredicted RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 TBK1Q9UHD2 729 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 PCDHGA9Q9Y5G4 932 aaKnown RBP11.46□□□□□ -0.57
SRP54-206ENST00000555317 HS3ST3B1Q9Y662 390 aa11.46□□□□□ -0.57
SRP54-206ENST00000555317 GCN1Q92616 2671 aaKnown RBP11.46□□□□□ -0.58
SRP54-206ENST00000555317 MYO18BQ8IUG5 2567 aa11.46□□□□□ -0.58
SRP54-206ENST00000555317 SCN2AQ99250 2005 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 SMIM23A6NLE4 172 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 B8ZZF3 427 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 SOCS6O14544 535 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 ERI3O43414 337 aaKnown RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 GALR3O60755 368 aaPredicted RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 CLEC3AO75596 197 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 C8orf89P0DMQ9 161 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 MTHFD2P13995 350 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 KRT15P19012 456 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 TAC1P20366 129 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 IL10P22301 178 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 JAK1P23458 1154 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 SERPINB1P30740 379 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 RAB8AP61006 207 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 VSNL1P62760 191 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 RAPSNQ13702 412 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 GTF2H2Q13888 395 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 NAA30Q147X3 362 aaPredicted RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 FAAH2Q6GMR7 532 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 GTF2H2CQ6P1K8 395 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 METTL2BQ6P1Q9 378 aaKnown RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 MED27Q6P2C8 311 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 TRIM40Q6P9F5 258 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 TIFABQ6ZNK6 161 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 ZNF605Q86T29 641 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 PTRH1Q86Y79 214 aaKnown RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 PDSS2Q86YH6 399 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 AFAP1L2Q8N4X5 818 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 ACMSDQ8TDX5 336 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 UTP15Q8TED0 518 aaKnown RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 REPS1Q96D71 796 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 PHF21BQ96EK2 531 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 WDR34Q96EX3 536 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 OR1F2PQ96R84 312 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 CENPKQ9BS16 269 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 COPS7BQ9H9Q2 264 aaPredicted RBP11.45□□□□□ -0.58
SRP54-206ENST00000555317 ZNF358Q9NW07 568 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 ZNF451Q9Y4E5 1061 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 ASB1Q9Y576 335 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 NBASA2RRP1 2371 aa11.45□□□□□ -0.58
SRP54-206ENST00000555317 DOCK10Q96BY6 2186 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 KLK8O60259 260 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 ALOX12BO75342 701 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 BMP10O95393 424 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 HPP00738 406 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 CYC1P08574 325 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 RNH1P13489 461 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 GCAP28676 217 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 CASP2P42575 452 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 SLCO1A2P46721 670 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 CCNG1P51959 295 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 AP2B1P63010 937 aa11.44□□□□□ -0.58
SRP54-206ENST00000555317 EEF1A2Q05639 463 aaKnown RBP11.44□□□□□ -0.58
SRP54-206ENST00000555317 IFFO1Q0D2I5 559 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms