RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 IL21RQ9HBE5 538 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CNOT11Q9UKZ1 510 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 A0A1W2PPM1 405 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 RCBTB2O95199 551 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SOX14O95416 240 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 IFNA10P01566 189 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PFKLP17858 780 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 FBLP22087 321 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PREPP48147 710 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 VSX2P58304 361 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DSTNP60981 165 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TAF1AQ15573 450 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 NNATQ16517 81 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 GALNT15Q8N3T1 639 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 OR56B2PQ8NGI1 322 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 GLYATL2Q8WU03 294 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CDH20Q9HBT6 801 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 Q9N2J8 555 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF355PQ9NSJ1 428 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SERTAD4Q9NUC0 356 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CABIN1Q9Y6J0 2220 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 KLF8O95600 359 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 GTF2F2P13984 249 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 AKR1C2P52895 323 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CAPSQ13938 189 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 BCL2L15Q5TBC7 163 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DOK4Q8TEW6 326 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TSPAN18Q96SJ8 248 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ACSS3Q9H6R3 686 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CD163L1Q9NR16 1453 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 VILLO15195 856 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DNAJA2O60884 412 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 MAFO75444 373 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ENGP17813 658 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CRHR1P34998 444 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PRKD1Q15139 912 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PPA1Q15181 289 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 FAM189A2Q15884 450 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 C3orf38Q5JPI3 329 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 HMGN2P46Q86SG4 172 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 STK35Q8TDR2 534 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF431Q8TF32 576 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CENPNQ96H22 339 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SCLYQ96I15 445 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DCBLD2Q96PD2 775 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PDCD1LG2Q9BQ51 273 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TUBG2Q9NRH3 451 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PPM1HQ9ULR3 514 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 IRF5Q13568 498 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FLYWCH1Q4VC44 716 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 CAMKVQ8NCB2 501 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PROKR1Q8TCW9 393 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SEC14L1Q92503 715 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 S100A16Q96FQ6 103 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PITX2Q99697 317 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 POLDIP3Q9BY77 421 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 GNB4Q9HAV0 340 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FAM118AQ9NWS6 357 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 DIP2AQ14689 1571 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 A8MVJ9 347 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FOXO6A8MYZ6 492 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SPATA31C2B4DYI2 1134 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PROM1O43490 865 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 RP2O75695 350 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ACADVLP49748 655 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 AIF1P55008 147 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ARL16Q0P5N6 197 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 KLF10Q13118 480 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 MBOAT1Q6ZNC8 495 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ARL14Q8N4G2 192 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LNX1Q8TBB1 728 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OSTF1Q92882 214 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 EIF2B3Q9NR50 452 aaKnown RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 A0A1W2PPK0 400 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ANKRD28O15084 1053 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ABHD2P08910 425 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 H2BFMP0C1H6 154 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 HLA-EP13747 358 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ADRA1BP35368 520 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 INHBEP58166 350 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ERVK-16P61578 105 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SERINC3Q13530 473 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 PON3Q15166 354 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 BTBD16Q32M84 506 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LRIF1Q5T3J3 769 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 SMYD5Q6GMV2 418 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 VSTM1Q6UX27 236 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 TMCO2Q7Z6W1 182 aaPredicted RBP6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF584Q8IVC4 421 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 ART4Q93070 314 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 FBXL8Q96CD0 374 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OR14A2Q96R54 314 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 IL17RBQ9NRM6 502 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 COPZ2Q9P299 210 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 EPHA6Q9UF33 1036 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 NUP205Q92621 2012 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 LOC102723532A0A0G2JNH3 316 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 OR6C70A6NIJ9 312 aa6.67□□□□□ -1.34
SYNE2-216ENST00000555002 DIRAS3O95661 229 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms