RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 AARSD1Q9BTE6 412 aaKnown RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
SIX1-203ENST00000554986 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 INVSQ9Y283 1065 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 ZSCAN5BA6NJL1 495 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 J3KR12 359 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 SLITRK5O94991 958 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 CD160O95971 181 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 IL7P13232 177 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 OGNP20774 298 aaKnown RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 MAGP20916 626 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 FPR1P21462 350 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 PRKACBP22694 351 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 ARL1P40616 181 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 OR3A3P47888 321 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 AP2S1P53680 142 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 SIM2Q14190 667 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 EIF4HQ15056 248 aaKnown RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 TIGD6Q17RP2 521 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 CDONQ4KMG0 1287 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 C2orf27AQ580R0 203 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 RUNDC3AQ59EK9 446 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 GPRIN3Q6ZVF9 776 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 GLB1L3Q8NCI6 653 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 OR10A6Q8NH74 314 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 SLC13A3Q8WWT9 602 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 SLC7A6Q92536 515 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 SLC30A2Q9BRI3 323 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 MIR1-1HGQ9H1L0 117 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 LMAN1LQ9HAT1 526 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 ATP13A2Q9NQ11 1180 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 MARCH4Q9P2E8 410 aaPredicted RBP12.85□□□□□ -0.35
SIX1-203ENST00000554986 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 SNX6Q9UNH7 406 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 CFL2Q9Y281 166 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 GPSM3Q9Y4H4 160 aa12.85□□□□□ -0.35
SIX1-203ENST00000554986 ANKRD12Q6UB98 2062 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 TRBV5-3A0A0A0MS03 114 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 WASH3PC4AMC7 463 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 K7ERQ8 282 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 PI15O43692 258 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 KDELR3O43731 214 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 ERP29P30040 261 aaKnown RBP12.84□□□□□ -0.35
SIX1-203ENST00000554986 DNAJA1P31689 397 aaKnown RBP12.84□□□□□ -0.35
SIX1-203ENST00000554986 AKT1P31749 480 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 OLR1P78380 273 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 GAS6Q14393 721 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 SYT16Q17RD7 645 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 NRARPQ7Z6K4 114 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 PLCZ1Q86YW0 608 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 SLC38A6Q8IZM9 456 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 RYBPQ8N488 228 aaPredicted RBP12.84□□□□□ -0.35
SIX1-203ENST00000554986 LSMEM1Q8N8F7 131 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 ZFAND1Q8TCF1 268 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 IMP4Q96G21 291 aaKnown RBP12.84□□□□□ -0.35
SIX1-203ENST00000554986 RHNO1Q9BSD3 238 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
SIX1-203ENST00000554986 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 PSORS1C1Q9UIG5 152 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 RIMKLBQ9ULI2 386 aa12.84□□□□□ -0.35
SIX1-203ENST00000554986 TEX51A0A1B0GUA7 166 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 MEIOCA2RUB1 952 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 SSX4O60224 188 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 DPM1O60762 260 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 DCNP07585 359 aaKnown RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 G6PDP11413 515 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 PRDX3P30048 256 aaKnown RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 MLLT3P42568 568 aaPredicted RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 IL12RB1P42701 662 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 PXNP49023 591 aaPredicted RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 ARSDP51689 593 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 ZNF234Q14588 700 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 SMN1Q16637 294 aaKnown RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 DGKKQ5KSL6 1271 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 TIGD3Q6B0B8 471 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 OR2T5Q6IEZ7 315 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 MRNIPQ6NTE8 343 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 C19orf48Q6RUI8 117 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 AHSA2Q719I0 299 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 GALNT5Q7Z7M9 940 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 ZNF366Q8N895 744 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 OR2T29Q8NH02 315 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 APH1BQ8WW43 257 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 NELL2Q99435 816 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 ZBTB18Q99592 522 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 COPS4Q9BT78 406 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 THUMPD3Q9BV44 507 aaKnown RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 GIMAP4Q9NUV9 329 aa12.83□□□□□ -0.35
SIX1-203ENST00000554986 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.35
SIX1-203ENST00000554986 SMAD6O43541 496 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms