RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 KCNK6Q9Y257 313 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF510Q9Y2H8 683 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 TEX264Q9Y6I9 313 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 DISP3Q9P2K9 1392 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 IL16Q14005 1332 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CCDC162PA2VCL2 907 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 A8MVM7 634 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CACNB4O00305 520 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZBTB14O43829 449 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 BCAS2O75934 225 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 REC8O95072 547 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CHRNGP07510 517 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 HMBSP08397 361 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 B4GALT1P15291 398 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 STMN1P16949 149 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 UGT1A6P19224 532 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 RBMS1P29558 406 aaKnown RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CHRNB4P30926 498 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 MAGEA11P43364 429 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 IER3P46695 156 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 XGP55808 180 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PMP22Q01453 160 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 SLC34A1Q06495 639 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ARHGAP1Q07960 439 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 TRIM29Q14134 588 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 FCN2Q15485 313 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ACKR1Q16570 336 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF74Q16587 644 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 LRRC37A5PQ49AS3 106 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CCDC92Q53HC0 331 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ARMCX4Q5H9R4 360 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 AGAP6Q5VW22 663 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 SLC25A47Q6Q0C1 308 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 C17orf107Q6ZR85 190 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 COX8CQ7Z4L0 72 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 RABEPKQ7Z6M1 372 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZSCAN30Q86W11 494 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM126BQ8IUX1 230 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CCDC60Q8IWA6 550 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 LAX1Q8IWV1 398 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 SMAP2Q8WU79 429 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CCDC47Q96A33 483 aaKnown RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 GIMAP5Q96F15 307 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF486Q96H40 463 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF560Q96MR9 790 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 LPAR4Q99677 370 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 DDX50Q9BQ39 737 aaKnown RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 NACAP1Q9BZK3 213 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 MTIF3Q9H2K0 278 aaKnown RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF71Q9NQZ8 489 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-213ENST00000554776 GPR173Q9NS66 373 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PNPLA3Q9NST1 481 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PANK4Q9NVE7 773 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 TBC1D13Q9NVG8 400 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 CYP39A1Q9NYL5 469 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 HACD3Q9P035 362 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PSORS1C1Q9UIG5 152 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PLCL2Q9UPR0 1127 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 EXOC6BQ9Y2D4 811 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 ANGPTL3Q9Y5C1 460 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 SPATA31D1Q6ZQQ2 1576 aa2.73□□□□□ -1.97
SCFD1-213ENST00000554776 PFASO15067 1338 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 A0A087WUV0 522 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 A0A087X002 238 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 MSGN1A6NI15 193 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF732B4DXR9 585 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 HHLA1C9JL84 531 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 TLR4O00206 839 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 O00370 1275 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 KLF11O14901 512 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SAP30O75446 220 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 LETM1O95202 739 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SEC24AO95486 1093 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 YES1P07947 543 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SLC2A2P11168 524 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 CEACAM1P13688 526 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ELAVL4P26378 380 aaKnown RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SOX3P41225 446 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 VEGFCP49767 419 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SLC12A3P55017 1021 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 OR1D5P58170 312 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ERVK11-1P61568 191 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 KCNJ10P78508 379 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PDE7AQ13946 482 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 HNRNPDQ14103 355 aaKnown RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PPA1Q15181 289 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PTPN14Q15678 1187 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 DUSP5Q16690 384 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 FUT11Q495W5 492 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 FBXL22Q6P050 247 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 TATDN1Q6P1N9 297 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ISLR2Q6UXK2 745 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 GPC2Q8N158 579 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PRSS35Q8N3Z0 413 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 NIPA2Q8N8Q9 360 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PSMA8Q8TAA3 256 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SNED1Q8TER0 1413 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 SEPT8Q92599 483 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ARHGAP45Q92619 1136 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms