RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 KCNC4Q03721 635 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 GPR68Q15743 365 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 NCEH1Q6PIU2 408 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SLC22A15Q8IZD6 547 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 DCAF4L2Q8NA75 395 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 C7orf57Q8NEG2 295 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 OR10Q1Q8NGQ4 319 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 OR2AJ1Q8NGZ0 328 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 HIST1H2AAQ96QV6 131 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 AKAP12Q02952 1782 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SLC33A1O00400 549 aaPredicted RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SMAD9O15198 467 aaKnown RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 APLP1P51693 650 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 CHERPQ8IWX8 916 aaKnown RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SLC5A11Q8WWX8 675 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 RANBP9Q96S59 729 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 WACQ9BTA9 647 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 DPEP2Q9H4A9 486 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 TAC3Q9UHF0 121 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 H7C2Y5 167 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 IFNA21P01568 189 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF181Q2M3W8 571 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 LRRC66Q68CR7 880 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 XKRXQ6PP77 449 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TMCO2Q7Z6W1 182 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM135Q86UB9 458 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SNX29P2Q8IUI4 249 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 CMTR2Q8IYT2 770 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SLC2A13Q96QE2 648 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TRIB3Q96RU7 358 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 CRTAC1Q9NQ79 661 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 C6orf47O95873 294 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 PENKP01210 267 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SLC35E2BP0CK96 405 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 MAGEA11P43364 429 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 RPS3AP61247 264 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 NIPAL4Q0D2K0 466 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF267Q14586 743 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SIAH1Q8IUQ4 282 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 LNX2Q8N448 690 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF675Q8TD23 568 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SLC31A1O15431 190 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 HLCSP50747 726 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 PGDP52209 483 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SHQ1Q6PI26 577 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TMIGD1Q6UXZ0 262 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF527Q8NB42 609 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TMIEQ8NEW7 156 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 GRHL3Q8TE85 626 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 PHOX2BQ99453 314 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 AIG1Q9NVV5 245 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 CNTN5O94779 1100 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 JUNP05412 331 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ACP5P13686 325 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 BMP8BP34820 402 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 AGTR2P50052 363 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 PDX1P52945 283 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 S100A10P60903 97 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM145Q8NBT3 493 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 FBXO15Q8NCQ5 510 aaPredicted RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 PROKR2Q8NFJ6 384 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
VTI1B-204ENST00000554659 TSSK6Q9BXA6 273 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
VTI1B-204ENST00000554659 GABARAPL2P60520 117 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CREB5Q02930 508 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 COQ5Q5HYK3 327 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 PLEKHS1Q5SXH7 462 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 TMED4Q7Z7H5 227 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SYVN1Q86TM6 617 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 HDDC3Q8N4P3 179 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 WDTC1Q8N5D0 677 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SGCDQ92629 289 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CD180Q99467 661 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 FBXO9Q9UK97 447 aaPredicted RBP13.49□□□□□ -0.25
VTI1B-204ENST00000554659 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 A0A1W2PRU2 124 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 AURKAO14965 403 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 NDUFS4O43181 175 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 COQ9O75208 318 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CHRNA1P02708 482 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 IVDP26440 423 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms