RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TBC1D1Q86TI0 1168 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 PLXDC1Q8IUK5 500 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SLC22A15Q8IZD6 547 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 D2HGDHQ8N465 521 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 NKAPQ8N5F7 415 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF548Q8NEK5 533 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 OR52N2Q8NGI0 321 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ASZ1Q8WWH4 475 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TMEM159Q96B96 161 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 PTERQ96BW5 349 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 C1GALT1C1Q96EU7 318 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 APOPT1Q96IL0 206 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RMDN2Q96LZ7 410 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 MRI1Q9BV20 369 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 DERL2Q9GZP9 239 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 WWP1Q9H0M0 922 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 STMN4Q9H169 189 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ARRDC1-AS1Q9H2J1 176 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 DPEP2Q9H4A9 486 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 OSGEPL1Q9H4B0 414 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 IL21RQ9HBE5 538 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SYTL2Q9HCH5 934 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 PRDM8Q9NQV8 689 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TMEM140Q9NV12 185 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 SENP1Q9P0U3 644 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TAAR2Q9P1P5 351 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 TBC1D29Q9UFV1 150 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 EMCNQ9ULC0 261 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RAB23Q9ULC3 237 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 ACSL5Q9ULC5 683 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RUVBL2Q9Y230 463 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 RUVBL1Q9Y265 456 aaKnown RBP6.1□□□□□ -1.43
SCFD1-212ENST00000554486 WDR37Q9Y2I8 494 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 MYO15AQ9UKN7 3530 aa6.1□□□□□ -1.43
SCFD1-212ENST00000554486 DNAH14Q0VDD8 3507 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ZNF292O60281 2723 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 RP1P56715 2156 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 A0A1B0GTQ1 180 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ARHGEF33A8MVX0 844 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TARM1B6A8C7 271 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 LMO7DNF2Z398 122 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 H3BML4 177 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 GFYI3L273 518 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 CDC7O00311 574 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 BTN3A1O00481 513 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 COPEO14579 308 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 YY2O15391 372 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 PRPF4O43172 522 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 AQP9O43315 295 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SNX2O60749 519 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SDC3O75056 442 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 GLRA3O75311 464 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 RETP07949 1114 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 GSTA1P08263 222 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 GIMD1P0DJR0 217 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 CTSEP14091 401 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 VCLP18206 1134 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TFEBP19484 476 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 IDSP22304 550 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 NBL1P41271 181 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ACTR1BP42025 376 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ACTR1AP61163 376 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ATP6V0D1P61421 351 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 PLOD1Q02809 727 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ILF3Q12906 894 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 CLCA4Q14CN2 919 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 OR4D1Q15615 310 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TSNQ15631 228 aaKnown RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 FAM83EQ2M2I3 478 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 HLA-BQ31612 363 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 N4BP2L1Q5TBK1 243 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 AGAP9Q5VTM2 703 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TCEAL6Q6IPX3 200 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 LRRC8EQ6NSJ5 796 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 DUS1LQ6P1R4 473 aaKnown RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 LVRNQ6Q4G3 990 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SBSNQ6UWP8 590 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ABRAXAS1Q6UWZ7 409 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 WASH2PQ6VEQ5 465 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 Q6ZRM9 215 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SEM1Q6ZVN7 128 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TAF8Q7Z7C8 310 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ISCA2Q86U28 154 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SFTPA2Q8IWL1 248 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SLC25A45Q8N413 288 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 FSTL5Q8N475 847 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 LMX1AQ8TE12 382 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ST8SIA2Q92186 375 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ATOH1Q92858 354 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TCEAL3Q969E4 200 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 KIAA1191Q96A73 305 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 PKNOX2Q96KN3 472 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SMC6Q96SB8 1091 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ATOH8Q96SQ7 321 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 GSDMCQ9BYG8 508 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TMPRSS5Q9H3S3 457 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ALG9Q9H6U8 611 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 NMRAL1Q9HBL8 299 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 MED4Q9NPJ6 270 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms