RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DDX5P17844 614 aaKnown RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 SSR2P43308 183 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 ATP4BP51164 291 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 VSX2P58304 361 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 INSM1Q01101 510 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 HMGCS1Q01581 520 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 EMX2Q04743 252 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 AP5B1Q2VPB7 878 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 LSM12Q3MHD2 195 aaKnown RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 GALNTL6Q49A17 601 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 TOR1AIP1Q5JTV8 583 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 VWA5B1Q5TIE3 1220 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 SCIMPQ6UWF3 145 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 Q6ZSR9 355 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 KIAA2013Q8IYS2 634 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 CACTIN-AS1Q8N1I8 211 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 METTL4Q8N3J2 472 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 MVB12AQ96EY5 273 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 LIN37Q96GY3 246 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 CMKLR1Q99788 373 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 EBF4Q9BQW3 602 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 TBCDQ9BTW9 1192 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 RABEP2Q9H5N1 569 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 WDR55Q9H6Y2 383 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-210ENST00000553950 AKTIPQ9H8T0 292 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 KCNK13Q9HB14 408 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 FAM60AQ9NP50 221 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 FGF21Q9NSA1 209 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 PTGDR2Q9Y5Y4 395 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 SLC22A7Q9Y694 548 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.2
SHMT2-210ENST00000553950 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 A8MU76 341 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 TMEM150CB9EJG8 249 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 SLC22A2O15244 555 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ERI3O43414 337 aaKnown RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 PEX11AO75192 247 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 GUCY1B2O75343 617 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 OR2B3O76000 313 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 DKK1O94907 266 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 HBQ1P09105 142 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ADSLP30566 484 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ASMTP46597 345 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 GABRA4P48169 554 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ARSFP54793 590 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 RAB15P59190 212 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 IL11RAQ14626 422 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 MUM1Q2TAK8 710 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 PRTGQ2VWP7 1150 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 DEFB110Q30KQ9 67 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 FAM214AQ32MH5 1076 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 CCDC157Q569K6 752 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 C6orf136Q5SQH8 315 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 CDCP2Q5VXM1 449 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 FRMPD2BQ6IN97 320 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ADNP2Q6IQ32 1131 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 GALNT18Q6P9A2 607 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 ZNF574Q6ZN55 896 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 TMPRSS9Q7Z410 1059 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 COMMD6Q7Z4G1 85 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 OR2T11Q8NH01 316 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 MS4A6EQ96DS6 147 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 FCRL1Q96LA6 429 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 C3orf30Q96M34 536 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 FCRL4Q96PJ5 515 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 OR52B2Q96RD2 323 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 CLK4Q9HAZ1 481 aaKnown RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 TMEM45AQ9NWC5 275 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 TOR4AQ9NXH8 423 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 SIDT1Q9NXL6 827 aaKnown RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 MCM8Q9UJA3 840 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 RARRES3Q9UL19 164 aa13.82□□□□□ -0.2
SHMT2-210ENST00000553950 WBP11Q9Y2W2 641 aaKnown RBP13.82□□□□□ -0.2
SHMT2-210ENST00000553950 B4E171 279 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 E9PBE3 544 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 PLPP1O14494 284 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 PCDH7O60245 1069 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 KLHL41O60662 606 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 SCELO95171 688 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 FTH1P19P0C7X4 201 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 RPL3P39023 403 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 TSPAN7P41732 249 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 MRPL19P49406 292 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 PDX1P52945 283 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 ZNF763Q0D2J5 394 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 TBL3Q12788 808 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 FAM53BQ14153 422 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 SQLEQ14534 574 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 IKBIPQ70UQ0 350 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 ZCCHC7Q8N3Z6 543 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 C1orf52Q8N6N3 182 aaKnown RBP13.81□□□□□ -0.2
SHMT2-210ENST00000553950 ADAMTS18Q8TE60 1221 aa13.81□□□□□ -0.2
SHMT2-210ENST00000553950 CHTF18Q8WVB6 975 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms