RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ZNF888P0CJ79 500 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ALAS2P22557 587 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 PTX3P26022 381 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 RPL14P50914 215 aaKnown RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SNRPNP63162 240 aaKnown RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 OCRLQ01968 901 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ZNF33BQ06732 778 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 FAM53BQ14153 422 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ADPRMQ3LIE5 342 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 UGT3A2Q3SY77 523 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 TMEM35AQ53FP2 167 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 KHDRBS2Q5VWX1 349 aaKnown RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 CHSY3Q70JA7 882 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ERMP1Q7Z2K6 904 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 HOMEZQ8IX15 550 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 AFAP1L2Q8N4X5 818 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 ZCCHC10Q8TBK6 192 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 PROKR1Q8TCW9 393 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 MS4A6EQ96DS6 147 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 CLIP3Q96DZ5 547 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 F2RL3Q96RI0 385 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SERPINI1Q99574 410 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SPRY4Q9C004 299 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 BRF2Q9HAW0 419 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 THSD1Q9NS62 852 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 TXLNGQ9NUQ3 528 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 DHCR7Q9UBM7 475 aaKnown RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 TMEM184BQ9Y519 407 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-209ENST00000553949 DNAJC15Q9Y5T4 150 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 SLC22A7Q9Y694 548 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 HEATR5BQ9P2D3 2071 aa11.64□□□□□ -0.55
SHMT2-209ENST00000553949 KIF26BQ2KJY2 2108 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 A0A1B0GX78 115 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 MED19A0JLT2 244 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 SERTM1A2A2V5 107 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 SAP18O00422 153 aaKnown RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 DSCR3O14972 297 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 ERI3O43414 337 aaKnown RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 DLGAP3O95886 979 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 SMIM10L1P0DMW3 83 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 HSD3B1P14060 373 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 ALOX12P18054 663 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 HSD3B2P26439 372 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 CD82P27701 267 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 RORAP35398 523 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 MDH1P40925 334 aaKnown RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 PLA2G16P53816 162 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 RAB8AP61006 207 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 GUCY1A3Q02108 690 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 TGM3Q08188 693 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 CSTF3Q12996 717 aaKnown RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 CUL3Q13618 768 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 HERC3Q15034 1050 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 DEPDC1Q5TB30 811 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 C1orf189Q5VU69 101 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 RNF165Q6ZSG1 346 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 TRIM46Q7Z4K8 759 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 DTWD1Q8N5C7 304 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 METTL27Q8N6F8 245 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 GBP7Q8N8V2 638 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 GALNT6Q8NCL4 622 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 OR2L5Q8NG80 312 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 TWIST2Q8WVJ9 160 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 GAL3ST3Q96A11 431 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 MVB12AQ96EY5 273 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 SMIM10Q96HG1 83 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 ZNF578Q96N58 590 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-209ENST00000553949 LRFN5Q96NI6 719 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 GBP5Q96PP8 586 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 CENPKQ9BS16 269 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 TUBB1Q9H4B7 451 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 ANKHQ9HCJ1 492 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 PNPOQ9NVS9 261 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 ANGPTL2Q9UKU9 493 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 SLC12A4Q9UP95 1085 aa11.63□□□□□ -0.55
SHMT2-209ENST00000553949 A0A0A6YYC8 382 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-209ENST00000553949 TEX51A0A1B0GUA7 166 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 C4orf51C9J302 202 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 STMND1H3BQB6 276 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 I3L1I5 382 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-209ENST00000553949 MEN1O00255 615 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 FOXS1O43638 330 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-209ENST00000553949 SEMA3DO95025 777 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 B3GALT4O96024 378 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 IL1RNP18510 177 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 ITGAXP20702 1163 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 AVPR1BP47901 424 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 HMGCS1Q01581 520 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 MAP7Q14244 749 aa11.62□□□□□ -0.55
SHMT2-209ENST00000553949 TBC1D25Q3MII6 688 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms