RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TSLPQ969D9 159 aa9.32□□□□□ -0.92
ACTN1-210ENST00000553779 TBC1D20Q96BZ9 403 aa9.32□□□□□ -0.92
ACTN1-210ENST00000553779 SERPINB12Q96P63 405 aa9.32□□□□□ -0.92
ACTN1-210ENST00000553779 AARSD1Q9BTE6 412 aaKnown RBP9.32□□□□□ -0.92
ACTN1-210ENST00000553779 CDCP1Q9H5V8 836 aa9.32□□□□□ -0.92
ACTN1-210ENST00000553779 PCDHGB6Q9Y5F9 930 aa9.32□□□□□ -0.92
ACTN1-210ENST00000553779 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 PRMT3O60678 531 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 HAUS5O94927 633 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 GUCA1CO95843 209 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 SP1P08047 785 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 PGAM1P18669 254 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 AGAP20933 346 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 HNF4AP41235 474 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 CYB561P49447 251 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 RIPPLY3P57055 190 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 SLC26A5P58743 744 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
ACTN1-210ENST00000553779 CSHL1Q14406 222 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 SLC25A25Q6KCM7 469 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 CCDC137Q6PK04 289 aaKnown RBP9.31□□□□□ -0.92
ACTN1-210ENST00000553779 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 C3P1Q6ZMU1 363 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 RPS19BP1Q86WX3 136 aaKnown RBP9.31□□□□□ -0.92
ACTN1-210ENST00000553779 LRRC56Q8IYG6 542 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-210ENST00000553779 LGI4Q8N135 537 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 ARHGEF39Q8N4T4 335 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 AMER2Q8N7J2 671 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 GPATCH11Q8N954 259 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 MCUQ8NE86 351 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 OR5T3Q8NGG3 340 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 AGAP11Q8TF27 550 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 THAP3Q8WTV1 239 aaPredicted RBP9.31□□□□□ -0.92
ACTN1-210ENST00000553779 TSNARE1Q96NA8 513 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 FRMD6Q96NE9 622 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 PTCHD1Q96NR3 888 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 DEFB126Q9BYW3 111 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 ASIC3Q9UHC3 531 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 ADAMTS6Q9UKP5 1117 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 PPT2Q9UMR5 302 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 SH2B3Q9UQQ2 575 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 PDE10AQ9Y233 779 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 MEMO1Q9Y316 297 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 SLC22A7Q9Y694 548 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 NINQ8N4C6 2090 aa9.31□□□□□ -0.92
ACTN1-210ENST00000553779 ABCA4P78363 2273 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CSMD2Q7Z408 3487 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 AKAP9Q99996 3911 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ZCWPW2A0A1B0GU75 182 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 TRBC2A0A5B9 178 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 USP27XA6NNY8 438 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 A8MUA0 341 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 PGRMC1O00264 195 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 FANCGO15287 622 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 SLC16A5O15375 505 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ASNA1O43681 348 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 TPOP07202 933 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 RNH1P13489 461 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ALOX12P18054 663 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 SAT1P21673 171 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 TPP2P29144 1249 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 MAGEA6P43360 314 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 EFNA3P52797 238 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 AP1S2P56377 157 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 IL2P60568 153 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ADORA2A-AS1P86434 159 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 HSF1Q00613 529 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 RHAGQ02094 409 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CRYMQ14894 314 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 DUPD1Q68J44 220 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 H3F3CQ6NXT2 135 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 MEX3BQ6ZN04 569 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 FRA10AC1Q70Z53 315 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 PDSS2Q86YH6 399 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 PPIL6Q8IXY8 311 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 TMEM156Q8N614 296 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CPSF7Q8N684 471 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ZNF740Q8NDX6 193 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CCT6BQ92526 530 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 PYCR2Q96C36 320 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 SDCCAG3Q96C92 435 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CFAP36Q96G28 342 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 SCMH1Q96GD3 660 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 FAR2Q96K12 515 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 EGFL8Q99944 293 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 CCDC77Q9BR77 488 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 FBXW2Q9UKT8 454 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ERVK-11Q9UQG0 969 aa9.3□□□□□ -0.92
ACTN1-210ENST00000553779 KLF13Q9Y2Y9 288 aaPredicted RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 ANKHD1Q8IWZ3 2542 aaKnown RBP9.3□□□□□ -0.92
ACTN1-210ENST00000553779 TRBV11-1A0A0K0K1C0 115 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 SAGE2PA6NJ88 616 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 KLRC4-KLRK1H3BQV0 150 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 CHST10O43529 356 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 LCMT2O60294 686 aaKnown RBP9.29□□□□□ -0.92
ACTN1-210ENST00000553779 NME2P1O60361 137 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 MAN1A2O60476 641 aa9.29□□□□□ -0.92
ACTN1-210ENST00000553779 GALR3O60755 368 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms