RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NAT16Q8N8M0 369 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 BPIFB6Q8NFQ5 453 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 OR8D1Q8WZ84 308 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RORBQ92753 470 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CDX2Q99626 313 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 FUNDC2Q9BWH2 189 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 GABARAPL3Q9BY60 117 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 NAA50Q9GZZ1 169 aaKnown RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 EPS8L2Q9H6S3 715 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 TRIM39Q9HCM9 518 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 NECTIN3Q9NQS3 549 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 THUMPD1Q9NXG2 353 aaKnown RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 B3GNT3Q9Y2A9 372 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 KIF26AQ9ULI4 1882 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 EDDM13A0A1B0GTR0 161 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 KPNA3O00505 521 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 PFDN1O60925 122 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 NDUFS2O75306 463 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 FOSL2P15408 326 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF182P17025 639 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 AGXTP21549 392 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ACVR2AP27037 513 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RPS13P62277 151 aaKnown RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 KCNJ10P78508 379 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CRTC3Q6UUV7 619 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CCDC80Q76M96 950 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 OR52N2Q8NGI0 321 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 OR2L2Q8NH16 312 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 SORCS1Q8WY21 1168 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 NUS1Q96E22 293 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 HRASLS5Q96KN8 279 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 GUCD1Q96NT3 240 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RIBC2Q9H4K1 309 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 PREBQ9HCU5 417 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 DMRT3Q9NQL9 472 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 LMCD1Q9NZU5 365 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ERVK-11Q9UQG0 969 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 PIPSLA2A3N6 862 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 YY2O15391 372 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 GABARAPO95166 117 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 SOD1P00441 154 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CYP17A1P05093 508 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 ANXA8P13928 327 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 PDHA2P29803 388 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 HSD17B2P37059 387 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CLK3P49761 638 aaKnown RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 C21orf59P57076 290 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 PPP1R8Q12972 351 aaKnown RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 NPRL3Q12980 569 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CAMK2GQ13555 558 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 ELAVL3Q14576 367 aaKnown RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 MAD2L1BPQ15013 274 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF630Q2M218 657 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 HNRNPA1L2Q32P51 320 aaKnown RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CCSMST1Q4G0I0 132 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF648Q5T619 568 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 MLIPQ5VWP3 458 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 PRSS48Q7RTY5 328 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 COMMD6Q7Z4G1 85 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 VTCN1Q7Z7D3 282 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 B3GNT8Q7Z7M8 397 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CFAP206Q8IYR0 622 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 METTL4Q8N3J2 472 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 ATG16L2Q8NAA4 619 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 OR4A15Q8NGL6 344 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CDC26Q8NHZ8 85 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 FAR1Q8WVX9 515 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 SLC5A11Q8WWX8 675 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 FCGR1BQ92637 280 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CCDC177Q9NQR7 707 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-205ENST00000553474 THSD1Q9NS62 852 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 AHSPQ9NZD4 102 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 SH3BP4Q9P0V3 963 aa12.4□□□□□ -0.42
SHMT2-205ENST00000553474 KRT87PA6NCN2 255 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 PTGES3LE9PB15 166 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 hCG_2039718K7EN88 272 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 GPR37L1O60883 481 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 CBFA2T3O75081 653 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 TNFRSF21O75509 655 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 KRT75O95678 551 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 FURINP09958 794 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 EFNA1P20827 205 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 SERPINB1P30740 379 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 GPR1P46091 355 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 GSTM5P46439 218 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 GALK1P51570 392 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 TAP2Q03519 686 aa12.39□□□□□ -0.43
SHMT2-205ENST00000553474 SLBPQ14493 270 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHMT2-205ENST00000553474 ARHGAP19Q14CB8 494 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms