RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 LNX2Q8N448 690 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 FITM2Q8N6M3 262 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 DCAF4L2Q8NA75 395 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 ANKRD52Q8NB46 1076 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 SLC4A11Q8NBS3 891 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 NAXEQ8NCW5 288 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 PPFIBP2Q8ND30 876 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 SLC35B2Q8TB61 432 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 PARD3BQ8TEW8 1205 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 CLEC4CQ8WTT0 213 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 MAIP1Q8WWC4 291 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 RAD54LQ92698 747 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 TBC1D20Q96BZ9 403 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 DGCR14Q96DF8 476 aaKnown RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 PTCD3Q96EY7 689 aaKnown RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 PPP1R16AQ96I34 528 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 FCRL4Q96PJ5 515 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 TSG101Q99816 390 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 ZSWIM1Q9BR11 485 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 CCDC77Q9BR77 488 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 NLNQ9BYT8 704 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 FRMD8Q9BZ67 464 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 CHST8Q9H2A9 424 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 ANLNQ9NQW6 1124 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 IRAK4Q9NWZ3 460 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 TRNAU1APQ9NX07 287 aaKnown RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 ARHGEF38Q9NXL2 777 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 KCTD5Q9NXV2 234 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 SENP1Q9P0U3 644 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 STX18Q9P2W9 335 aaKnown RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 KCNN3Q9UGI6 736 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 FETUBQ9UGM5 382 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 LGALS13Q9UHV8 139 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 TINAGQ9UJW2 476 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 AMFRQ9UKV5 643 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 BLOC1S6Q9UL45 172 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 ZNF148Q9UQR1 794 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 BTRCQ9Y297 605 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 MEMO1Q9Y316 297 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 PCYT1BQ9Y5K3 369 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-203ENST00000553353 AKAP6Q13023 2319 aa3.24□□□□□ -1.89
FOXN3-203ENST00000553353 MYH11P35749 1972 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TNRC6AQ8NDV7 1962 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 A0A1W2PPR1 153 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TSPAN11A1L157 253 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TRIM64CA6NLI5 447 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 LRRC53A6NM62 1247 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CXorf49A8MYA2 514 aaPredicted RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 H7C1Q1 480 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 XPO1O14980 1071 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CLIC2O15247 247 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PRPF4O43172 522 aaKnown RBP eCLIP3.23□□□□□ -1.892e-6■■■□□ 15.6
FOXN3-203ENST00000553353 PHF1O43189 567 aaPredicted RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 SLC19A2O60779 497 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CCDC22O60826 627 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CNOT3O75175 753 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PEX11AO75192 247 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TMCC1O94876 653 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 ENDOD1O94919 500 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TJP3O95049 919 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 GAS8O95995 478 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 MT-ND3P03897 115 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CELA2AP08217 269 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 KRT16P08779 473 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 ABHD2P08910 425 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 H2AFZP0C0S5 128 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 MYCLP1P12525 358 aaPredicted RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 FOLR1P15328 257 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 EGR1P18146 543 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 NELFEP18615 380 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TNNI1P19237 187 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CTNNA2P26232 953 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 HTR1BP28222 390 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CRABP2P29373 138 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PTDSS1P48651 473 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 RPL34P49207 117 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 SERPINH1P50454 418 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 RENBPP51606 427 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 RAP1GDS1P52306 607 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 MANFP55145 182 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PROK1P58294 105 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 KCNJ2P63252 427 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PHEXP78562 749 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 SLC34A1Q06495 639 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 KLHL30Q0D2K2 578 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 RALGDSQ12967 914 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 STK4Q13043 487 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 SNX1Q13596 522 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 SLC29A2Q14542 456 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TOMM20Q15388 145 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 NFIL3Q16649 462 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 ZCWPW2Q504Y3 356 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 HSP90AA5PQ58FG0 334 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 CARD16Q5EG05 197 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PRAMEF17Q5VTA0 474 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 HMBOX1Q6NT76 420 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 KLC3Q6P597 504 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 ALKBH5Q6P6C2 394 aaKnown RBP3.23□□□□□ -1.89
FOXN3-203ENST00000553353 TMEM154Q6P9G4 183 aa3.23□□□□□ -1.89
FOXN3-203ENST00000553353 PAMR1Q6UXH9 720 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms