RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TMCO1Q9UM00 188 aa14.51□□□□□ -0.09
SHMT2-204ENST00000553324 FER1L5A0AVI2 2057 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 LOC102723996A0A087X1L8 192 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 UBXN8O00124 270 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 FFAR3O14843 346 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 GPR42O15529 346 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 RIPK2O43353 540 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ALOX12BO75342 701 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 CLEC3AO75596 197 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 PDGFAP04085 211 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF888P0CJ79 500 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-204ENST00000553324 C8orf89P0DMQ9 161 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 SMIM10L1P0DMW3 83 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 GFAPP14136 432 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 EPB42P16452 691 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 JAK1P23458 1154 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 MAGEA12P43365 314 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 AGTR2P50052 363 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ALDH18A1P54886 795 aaKnown RBP14.5□□□□□ -0.09
SHMT2-204ENST00000553324 IRF9Q00978 393 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 MINDY4Q4G0A6 757 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 DEFB134Q4QY38 66 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 MFSD4BQ5TF39 518 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 TMEM205Q6UW68 189 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 IGFL3Q6UXB1 125 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 PRSS41Q7RTY9 318 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 PDSS2Q86YH6 399 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 TMEM151BQ8IW70 566 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 KBTBD2Q8IY47 623 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 UBTD2Q8WUN7 234 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ESAMQ96AP7 390 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 SMIM10Q96HG1 83 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 FAR2Q96K12 515 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 RHBGQ9H310 441 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 RIC8BQ9NVN3 520 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 HCN3Q9P1Z3 774 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 FETUBQ9UGM5 382 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ANGPTL3Q9Y5C1 460 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF462Q96JM2 2506 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 ANKRD12Q6UB98 2062 aa14.5□□□□□ -0.09
SHMT2-204ENST00000553324 FASNP49327 2511 aaKnown RBP14.49□□□□□ -0.09
SHMT2-204ENST00000553324 IGHV1-45A0A0A0MS14 117 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 LRIT2A6NDA9 550 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 RDH16O75452 317 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 WFS1O76024 890 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 MTHFD2P13995 350 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 GLRBP48167 497 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 PIK3CGP48736 1102 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 TLE1Q04724 770 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 TGM3Q08188 693 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 CHIT1Q13231 466 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 RAPSNQ13702 412 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 DOC2AQ14183 400 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 PFKFB4Q16877 469 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 FBXO48Q5FWF7 155 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 RIPOR1Q6ZS17 1223 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 PARP9Q8IXQ6 854 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 ZADH2Q8N4Q0 377 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 PLPP5Q8NEB5 264 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 SRFBP1Q8NEF9 429 aaKnown RBP14.49□□□□□ -0.09
SHMT2-204ENST00000553324 UHMK1Q8TAS1 419 aaKnown RBP14.49□□□□□ -0.09
SHMT2-204ENST00000553324 DCAKDQ8WVC6 231 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 TBC1D20Q96BZ9 403 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 C8orf44Q96CB5 159 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 GPR78Q96P69 363 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 VN1R1Q9GZP7 353 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF700Q9H0M5 742 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF160Q9HCG1 818 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 ADGRE2Q9UHX3 823 aa14.49□□□□□ -0.09
SHMT2-204ENST00000553324 MDC1Q14676 2089 aaKnown RBP14.49□□□□□ -0.09
SHMT2-204ENST00000553324 TRIM49D1C9J1S8 452 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 PSMD12O00232 456 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 CHST10O43529 356 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 KLK8O60259 260 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 SERPINA7P05543 415 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 FHP07954 510 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 COX6A1P12074 109 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 SERPINB1P30740 379 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 GMPRP36959 345 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 HNF4AP41235 474 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 RAB8AP61006 207 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 HYAL2Q12891 473 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 E2F2Q14209 437 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 SLC29A2Q14542 456 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 NAA30Q147X3 362 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 SETDB1Q15047 1291 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 PCBP2Q15366 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 UBAP2Q5T6F2 1119 aaKnown RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 JMJD6Q6NYC1 403 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 ADGRD1Q6QNK2 874 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 TIFABQ6ZNK6 161 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 CCT6BQ92526 530 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 GAL3ST3Q96A11 431 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 PEX11GQ96HA9 241 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 THOC3Q96J01 351 aaKnown RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 LMF1Q96S06 567 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 TUBB6Q9BUF5 446 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms