RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 MRGPREQ86SM8 312 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 TRABD2AQ86V40 505 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 PDSS2Q86YH6 399 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC22A9Q8IVM8 553 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 LAS2Q8IYD9 372 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 OR9A4Q8NGU2 314 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 RDH11Q8TC12 318 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 GAL3ST3Q96A11 431 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 NACC2Q96BF6 587 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 WBP1Q96G27 269 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 APOPT1Q96IL0 206 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 IP6K3Q96PC2 410 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 TGIF2Q9GZN2 237 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 IPPKQ9H8X2 491 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 ACTR8Q9H981 624 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 TRPC4Q9UBN4 977 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 EMCNQ9ULC0 261 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 MAN2B2Q9Y2E5 1009 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 TSC22D4Q9Y3Q8 395 aa11.11□□□□□ -0.63
TRAFD1-209ENST00000552896 TNRC6AQ8NDV7 1962 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 FOXO6A8MYZ6 492 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 COPEO14579 308 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 GALR3O60755 368 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 RDH16O75452 317 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 PROCP04070 461 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 UMODP07911 640 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 CYC1P08574 325 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ZGLP1P0C6A0 271 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 HNRNPH1P31943 449 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 CCT5P48643 541 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 SLC18A2Q05940 514 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF844Q08AG5 666 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 TRAF3Q13114 568 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 SSPNQ14714 243 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 TBR1Q16650 682 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 GGTA1PQ4G0N0 100 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 TOR1AIP1Q5JTV8 583 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 FAM69BQ5VUD6 431 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ZYG11AQ6WRX3 759 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 VN1R5Q7Z5H4 357 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ZC3H7AQ8IWR0 971 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 L3MBTL4Q8NA19 623 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 STT3BQ8TCJ2 826 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 REPS1Q96D71 796 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 CCDC126Q96EE4 140 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 L3HYPDHQ96EM0 354 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 MAGEB10Q96LZ2 347 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 NSUN5Q96P11 429 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 AICDAQ9GZX7 198 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 SEMA3GQ9NS98 782 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 MID2Q9UJV3 735 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 GRID1Q9ULK0 1009 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF490Q9ULM2 529 aaPredicted RBP11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 NAALAD2Q9Y3Q0 740 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 BSNQ9UPA5 3926 aa11.1□□□□□ -0.63
TRAFD1-209ENST00000552896 A0A088AWK7 358 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 LRIT2A6NDA9 550 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 C4orf51C9J302 202 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 H0YIV9 168 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SGK494L7N484 410 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OR7A17O14581 309 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PCDH17O14917 1159 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ATXN7O15265 892 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 DLX3O60479 287 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PLIN3O60664 434 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CLDN9O95484 217 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OTCP00480 354 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 IGHEP01854 428 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SMIM10L1P0DMW3 83 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 MYL2P10916 166 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF10P21506 573 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 MMP11P24347 488 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 OTX2P32243 289 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PIK3CBP42338 1070 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CCNG1P51959 295 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PRKAA2P54646 552 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 NAA20P61599 178 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PHEXP78562 749 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 KLC1Q07866 573 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 DEFB109BQ30KR1 87 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 DEFB134Q4QY38 66 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ZNF678Q5SXM1 525 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 C10orf62Q5T681 223 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 PPP1R32Q7Z5V6 425 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 CROCCP2Q86T23 111 aa11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 MYLK4Q86YV6 388 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 APLFQ8IW19 511 aaPredicted RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 SRRM1Q8IYB3 904 aaKnown RBP11.09□□□□□ -0.63
TRAFD1-209ENST00000552896 C4orf33Q8N1A6 199 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms