RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 GBP7Q8N8V2 638 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC38A9Q8NBW4 561 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CLEC1AQ8NC01 280 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 OR2L5Q8NG80 312 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 EPS8L3Q8TE67 593 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CCT6BQ92526 530 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 L3HYPDHQ96EM0 354 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SERPINI1Q99574 410 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 NRTNQ99748 197 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CCT7Q99832 543 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC29A3Q9BZD2 475 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 UNKQ9C0B0 810 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 REXO4Q9GZR2 422 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 ELOVL6Q9H5J4 265 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 BRF2Q9HAW0 419 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 DHCR7Q9UBM7 475 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TRPC4Q9UBN4 977 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 PLLPQ9Y342 182 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 PTRH2Q9Y3E5 179 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 FREM2Q5SZK8 3169 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 FAM208BQ5VWN6 2430 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 LRIT2A6NDA9 550 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 EIF4E1BA6NMX2 242 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 A8MT66 165 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 MKRN2OSH3BPM6 223 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 PLIN3O60664 434 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 SUPT7LO94864 414 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 SEMA3DO95025 777 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 ZWINTO95229 277 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 ALPPP05187 535 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 RPS17P08708 135 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 RNH1P13489 461 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 PCSK2P16519 638 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 MMP11P24347 488 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 ITPKBP27987 946 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 PPP2R1BP30154 601 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 GSTM5P46439 218 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 RAP1GDS1P52306 607 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 GALNT1Q10472 559 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 CUL3Q13618 768 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 RBBP7Q16576 425 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 ADPRMQ3LIE5 342 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 TUBB8Q3ZCM7 444 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 CEP85LQ5SZL2 805 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 C1orf189Q5VU69 101 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 LIPMQ5VYY2 423 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 FRG2Q64ET8 278 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 FAM198BQ6UWH4 519 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 HDXQ7Z353 690 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 GOLGA7Q7Z5G4 137 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 VN1R4Q7Z5H5 301 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 VASH2Q86V25 355 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 APLFQ8IW19 511 aaPredicted RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 PLD6Q8N2A8 252 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 AFAP1L2Q8N4X5 818 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 OR7G3Q8NG95 312 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 MZB1Q8WU39 189 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 RGMAQ96B86 450 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 METTL2AQ96IZ6 378 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 CNDP1Q96KN2 507 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 FRG2BQ96QU4 278 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 SERINC2Q96SA4 455 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF382Q96SR6 550 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 YIPF2Q9BWQ6 316 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 SHCBP1LQ9BZQ2 653 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 NOL11Q9H8H0 719 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 TRPS1Q9UHF7 1281 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 PCTPQ9UKL6 214 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 MAN2B2Q9Y2E5 1009 aa9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 MDC1Q14676 2089 aaKnown RBP9.75□□□□□ -0.85
TRAFD1-208ENST00000552890 VSTM2BA6NLU5 285 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 GOLGA8RI6L899 631 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 DYRK3O43781 588 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 LCMT2O60294 686 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 GALR3O60755 368 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 TRIM13O60858 407 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ULK1O75385 1050 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 CRCPO75575 148 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 KLHL18O94889 574 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 HEXBP07686 556 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ZGLP1P0C6A0 271 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 PCNAP12004 261 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 DDX5P17844 614 aaKnown RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC18A1P54219 525 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 EMP2P54851 167 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 MTTPP55157 894 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 CLCQ05315 142 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC9A5Q14940 896 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 NKG7Q16617 165 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ZXDCQ2QGD7 858 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 HKDC1Q2TB90 917 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF678Q5SXM1 525 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 BEND6Q5SZJ8 279 aaPredicted RBP9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 SH2D5Q6ZV89 423 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 GPRIN3Q6ZVF9 776 aa9.74□□□□□ -0.85
TRAFD1-208ENST00000552890 TRIM42Q8IWZ5 723 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms