RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TRBV5-7A0A0A0MS05 114 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 hCG_1807616A0A1W2PRN6 198 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 IGLON5A6NGN9 336 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 LRRC72A6NJI9 287 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 LIPT2A6NK58 231 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 D6RAR5 112 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 E5RJQ4 531 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM72CH0Y354 149 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TRAFD1O14545 582 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 LDLRAD4O15165 306 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TP73O15350 636 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SLC31A1O15431 190 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RRP8O43159 456 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PAGE4O60829 102 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TMCC2O75069 709 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CEACAM4O75871 244 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SORBS2O94875 1100 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CLDN1O95832 211 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 EML2O95834 649 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TRUB2O95900 331 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TFP02787 698 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 DNTTP04053 509 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FGF1P05230 155 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 HEXAP06865 529 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 HOXC4P09017 264 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 HOXB5P09067 269 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RALAP11233 206 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 UNGP13051 313 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ENO3P13929 434 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ADRB3P13945 408 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PRF1P14222 555 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PFKFB1P16118 471 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PDGFRAP16234 1089 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CD58P19256 250 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ITIH1P19827 911 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 HNRNPA2B1P22626 353 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RRM1P23921 792 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ATP5F1P24539 256 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CD1CP29017 333 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MPGP29372 298 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MAT2AP31153 395 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CHRNA3P32297 505 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TTKP33981 857 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PSMB10P40306 273 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RAD52P43351 418 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RGRP47804 291 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ARRB1P49407 418 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RGS7P49802 495 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SNX16P57768 344 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 KRTAP10-2P60368 255 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CCL7P80098 99 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 GCNT1Q02742 428 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF91Q05481 1191 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CSTF3Q12996 717 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ITGADQ13349 1161 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF177Q13360 481 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 RNPS1Q15287 305 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CDKN3Q16667 212 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ALG11Q2TAA5 492 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 GOLGA7BQ2TAP0 167 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 KRTAP21-3Q3LHN1 58 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 PTPN20Q4JDL3 420 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM52BQ4KMG9 183 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MIDNQ504T8 468 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CEP78Q5JTW2 689 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM72AQ5TYM5 149 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 NUGGCQ68CJ6 796 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM72DQ6L9T8 149 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 C16orf54Q6UWD8 224 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TMCO3Q6UWJ1 677 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF793Q6ZN11 406 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM83HQ6ZRV2 1179 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ERN2Q76MJ5 926 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SLC26A9Q7LBE3 791 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ARCQ7LC44 396 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGAP22Q7Z5H3 698 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SETD3Q86TU7 594 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM72BQ86X60 149 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZFAND4Q86XD8 727 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CAMK1DQ8IU85 385 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CNGA4Q8IV77 575 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 MFN1Q8IWA4 741 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 UNC45BQ8IWX7 931 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SYCP3Q8IZU3 236 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 LGI2Q8N0V4 545 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CADM3Q8N126 398 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ARHGAP18Q8N392 663 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 DCAF4L2Q8NA75 395 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 FAM98AQ8NCA5 519 aaKnown RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 HJURPQ8NCD3 748 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 TMEM116Q8NCL8 245 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 DENND6BQ8NEG7 585 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 GOLGA5Q8TBA6 731 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ZNF564Q8TBZ8 553 aaPredicted RBP2.3□□□□□ -2.04
CPSF6-207ENST00000551516 KCNE4Q8WWG9 221 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 SHC3Q92529 594 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 JAKMIP2Q96AA8 810 aa2.3□□□□□ -2.04
CPSF6-207ENST00000551516 ISG20Q96AZ6 181 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms