RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM125Q96AQ2 219 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 TBC1D20Q96BZ9 403 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 PEX11GQ96HA9 241 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 BAG1Q99933 345 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 CCDC177Q9NQR7 707 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 PLSCR2Q9NRY7 297 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 ABCF3Q9NUQ8 709 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 KLF13Q9Y2Y9 288 aaPredicted RBP9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 COMMD10Q9Y6G5 202 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 CAPN6Q9Y6Q1 641 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 MTORP42345 2549 aa9.23□□□□□ -0.93
TRAFD1-207ENST00000550051 INTS1Q8N201 2190 aaKnown RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 A0A1B0GTH9 108 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 FAM237BA0A1B0GVD1 139 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 TCRBV7S3A2A0A539 114 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 CHST10O43529 356 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 GALR3O60755 368 aaPredicted RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 DNAJB6O75190 326 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 FHP07954 510 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 HOXD4P09016 255 aaPredicted RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 SLC35G6P0C7Q6 338 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 TFEBP19484 476 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 JAK1P23458 1154 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 CHRNB4P30926 498 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 PTGER1P34995 402 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 GRK3P35626 688 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 COILP38432 576 aaPredicted RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 MAGEA6P43360 314 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 ZNF75DP51815 510 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 SKP1P63208 163 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 SARNPP82979 210 aaKnown RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 CUL1Q13616 776 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 LCTLQ6UWM7 567 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 KIAA0408Q6ZU52 694 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 CEP128Q6ZU80 1094 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 STRA8Q7Z7C7 330 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 TMEM139Q8IV31 216 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 LMNTD2Q8IXW0 634 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 KIF2BQ8N4N8 673 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 MARVELD2Q8N4S9 558 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 ZFP62Q8NB50 900 aaPredicted RBP9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 OR5T3Q8NGG3 340 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 RND1Q92730 232 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 TSLPQ969D9 159 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 SGPP1Q9BX95 441 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 CCDC68Q9H2F9 335 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 PARVBQ9HBI1 364 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 KCNJ16Q9NPI9 418 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 KCNN3Q9UGI6 736 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 SPG11Q96JI7 2443 aa9.22□□□□□ -0.93
TRAFD1-207ENST00000550051 ITPR3Q14573 2671 aa9.21□□□□□ -0.93
TRAFD1-207ENST00000550051 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 TCRBV16S1A1N1A0A5B0 115 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CTAGE9A4FU28 777 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 SDR42E2A6NKP2 422 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 FCHO1O14526 889 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 SLC16A5O15375 505 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 PEX1O43933 1283 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 PRMT3O60678 531 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 AVILO75366 819 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CDC123O75794 336 aaPredicted RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 TPOP07202 933 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 C8GP07360 202 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 MLNP12872 115 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ALOX12P18054 663 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 MSX1P28360 303 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ART1P52961 327 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ITGA8P53708 1063 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 TBPL1P62380 186 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CTBP1Q13363 440 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 THOC5Q13769 683 aaKnown RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 DHX34Q14147 1143 aaKnown RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CMPK2Q5EBM0 449 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CES4AQ5XG92 561 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF470Q6ECI4 717 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 LRRC8EQ6NSJ5 796 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ARHGAP11AQ6P4F7 1023 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 BLOC1S3Q6QNY0 202 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 AGTRAPQ6RW13 159 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 QSOX2Q6ZRP7 698 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CAND1Q86VP6 1230 aaKnown RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 DENND6AQ8IWF6 608 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CPNE9Q8IYJ1 553 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ZNF740Q8NDX6 193 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 ZCCHC10Q8TBK6 192 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CD200R1Q8TD46 325 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 MAIP1Q8WWC4 291 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 PTCHD1Q96NR3 888 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 GPR21Q99679 349 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 HAUS8Q9BT25 410 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 CXXC4Q9H2H0 198 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 TP63Q9H3D4 680 aaPredicted RBP9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 HOMER3Q9NSC5 361 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 SH2B3Q9UQQ2 575 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 PDE10AQ9Y233 779 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 RNF6Q9Y252 685 aa9.21□□□□□ -0.94
TRAFD1-207ENST00000550051 IGKV3D-11A0A0A0MRZ8 115 aa9.2□□□□□ -0.94
TRAFD1-207ENST00000550051 ZCWPW2A0A1B0GU75 182 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms