RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KCNE2Q9Y6J6 123 aa15.39■□□□□ 0.05
VPS29-207ENST00000549970 OR5H15A6NDH6 313 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 NCF1BA6NI72 391 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 NCF1CA8MVU1 366 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 CXorf49A8MYA2 514 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 CHST10O43529 356 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 WDR47O94967 919 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 LDLRP01130 860 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 FHP07954 510 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 NCF1P14598 390 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 IL10P22301 178 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 GDF5P43026 501 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 HNMTP50135 292 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 RAB8AP61006 207 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 CDKL1Q00532 357 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 POU4F1Q01851 419 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 ACTN3Q08043 901 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 CBLBQ13191 982 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 SFT2D3Q587I9 215 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 PAPD4Q6PIY7 484 aaKnown RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 C17orf53Q8N3J3 647 aaPredicted RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 SPATA6LQ8N4H0 392 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 PLPP5Q8NEB5 264 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 UTP15Q8TED0 518 aaKnown RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 CDKL2Q92772 493 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 TBC1D20Q96BZ9 403 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 TAAR6Q96RI8 345 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 SLX1AQ9BQ83 275 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 RNF32Q9H0A6 362 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 KCNK13Q9HB14 408 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 POPDC3Q9HBV1 291 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 OSGIN2Q9Y236 505 aa15.38■□□□□ 0.05
VPS29-207ENST00000549970 MTO1Q9Y2Z2 717 aaKnown RBP15.38■□□□□ 0.05
VPS29-207ENST00000549970 TCRBV9S1A1TA0A576 114 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 EIF3HO15372 352 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS29-207ENST00000549970 PHGDHO43175 533 aaKnown RBP15.37■□□□□ 0.05
VPS29-207ENST00000549970 B4GALT2O60909 372 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 CASQ1P31415 396 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 OR4D2P58180 307 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 USP10Q14694 798 aaKnown RBP15.37■□□□□ 0.05
VPS29-207ENST00000549970 EXT1Q16394 746 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 NIPAL1Q6NVV3 410 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 TRPV3Q8NET8 790 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 SUN3Q8TAQ9 357 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 RHBDF1Q96CC6 855 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 LPAR4Q99677 370 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 SLC6A16Q9GZN6 736 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 DERL2Q9GZP9 239 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 KLHL31Q9H511 634 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 GRHL1Q9NZI5 618 aa15.37■□□□□ 0.05
VPS29-207ENST00000549970 DIDO1Q9BTC0 2240 aaKnown RBP15.36■□□□□ 0.05
VPS29-207ENST00000549970 DOPEY1Q5JWR5 2465 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 WIPF3A6NGB9 483 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 URADA6NGE7 173 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 MAGEB17A8MXT2 336 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 WISP3O95389 354 aaPredicted RBP15.36■□□□□ 0.05
VPS29-207ENST00000549970 JAK1P23458 1154 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 SLC6A12P48065 614 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 ST13P50502 369 aaKnown RBP15.36■□□□□ 0.05
VPS29-207ENST00000549970 HYAL2Q12891 473 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 ILF2Q12905 390 aaKnown RBP15.36■□□□□ 0.05
VPS29-207ENST00000549970 TGFBIQ15582 683 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 INAQ16352 499 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 FBXO48Q5FWF7 155 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 TOR1AIP1Q5JTV8 583 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 ACER2Q5QJU3 275 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 SYT10Q6XYQ8 523 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 C3orf62Q6ZUJ4 267 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 CTAGE3PQ8IX95 158 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.36■□□□□ 0.05
VPS29-207ENST00000549970 BEST3Q8N1M1 668 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 M1APQ8TC57 530 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 TSPAN17Q96FV3 270 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 ZNF354BQ96LW1 612 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 RBBP8Q99708 897 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 CPNE1Q99829 537 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 WWOXQ9NZC7 414 aa15.36■□□□□ 0.05
VPS29-207ENST00000549970 UTP11Q9Y3A2 253 aaKnown RBP15.36■□□□□ 0.05
VPS29-207ENST00000549970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.36■□□□□ 0.05
VPS29-207ENST00000549970 FAM159BA6NKW6 160 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 C4orf51C9J302 202 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 LRRTM2O43300 516 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 PRAMEF2O60811 474 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 SERPINA6P08185 405 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 CCDC166P0CW27 439 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 C1GALT1C1LP0DN25 315 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 STMN1P16949 149 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 GNAZP19086 355 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 GP5P40197 560 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 PLTPP55058 493 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 SRSF11Q05519 484 aaKnown RBP15.35■□□□□ 0.05
VPS29-207ENST00000549970 SLBPQ14493 270 aaKnown RBP eCLIP15.35■□□□□ 0.05
VPS29-207ENST00000549970 ZNF324BQ6AW86 544 aaPredicted RBP15.35■□□□□ 0.05
VPS29-207ENST00000549970 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 CRLF3Q8IUI8 442 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 CYP4X1Q8N118 509 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 CREB3L4Q8TEY5 395 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 CCT6BQ92526 530 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 NR4A3Q92570 626 aa15.35■□□□□ 0.05
VPS29-207ENST00000549970 PTCHD1Q96NR3 888 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms