RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 KIR3DL1P43629 444 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 RGS1Q08116 209 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 ANKRD22Q5VYY1 191 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 ABHD13Q7L211 337 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 DOLPP1Q86YN1 238 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 SHISA5Q8N114 240 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 AFAP1L2Q8N4X5 818 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 ZNF740Q8NDX6 193 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 ABHD11Q8NFV4 315 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 TRIM58Q8NG06 486 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 EEF1AKMT1Q8WVE0 214 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 TSLPQ969D9 159 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 SERPINB12Q96P63 405 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 SARGQ9BW04 601 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 CLK4Q9HAZ1 481 aaKnown RBP12.74□□□□□ -0.37
TROAP-211ENST00000549891 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 ADAMTS6Q9UKP5 1117 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 SH2B3Q9UQQ2 575 aa12.74□□□□□ -0.37
TROAP-211ENST00000549891 TRBC2A0A5B9 178 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 URADA6NGE7 173 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 GOLGA8MH3BSY2 632 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 FANCGO15287 622 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 OR1F1O43749 312 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 PRMT3O60678 531 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 NPPBP16860 134 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
TROAP-211ENST00000549891 CDSNQ15517 529 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 DEFB134Q4QY38 66 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 HSP90AA5PQ58FG0 334 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 MBOAT1Q6ZNC8 495 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 QSOX2Q6ZRP7 698 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 STRA8Q7Z7C7 330 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
TROAP-211ENST00000549891 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
TROAP-211ENST00000549891 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 OR4K1Q8NGD4 311 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 OR5T3Q8NGG3 340 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 SNF8Q96H20 258 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 PTCHD1Q96NR3 888 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 DMRTA2Q96SC8 542 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 ENKD1Q9H0I2 346 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 TRIM45Q9H8W5 580 aaPredicted RBP12.73□□□□□ -0.37
TROAP-211ENST00000549891 MCCC2Q9HCC0 563 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 PPT2Q9UMR5 302 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 KLF13Q9Y2Y9 288 aaPredicted RBP12.73□□□□□ -0.37
TROAP-211ENST00000549891 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
TROAP-211ENST00000549891 HCFC1P51610 2035 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 PSMD12O00232 456 aaPredicted RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 CHST10O43529 356 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 B4GALT2O60909 372 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 SERPIND1P05546 499 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 CCDC175P0C221 793 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 CXCR5P32302 372 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 TRHRP34981 398 aaPredicted RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 MAGEA3P43357 314 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 HLCSP50747 726 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 AP1S2P56377 157 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 MLF1P58340 268 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 HSF1Q00613 529 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 TLE4Q04727 773 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 DHX9Q08211 1270 aaKnown RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 TMEM211Q6ICI0 200 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 CDH24Q86UP0 819 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 C2CD4AQ8NCU7 369 aaPredicted RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 NT5CQ8TCD5 201 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 MAGOHBQ96A72 148 aaKnown RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 SDCCAG3Q96C92 435 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 NDNQ99608 321 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 IARS2Q9NSE4 1012 aaKnown RBP12.72□□□□□ -0.37
TROAP-211ENST00000549891 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 ZFP69BQ9UJL9 534 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 ASB1Q9Y576 335 aa12.72□□□□□ -0.37
TROAP-211ENST00000549891 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 ZNF888P0CJ79 500 aaPredicted RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 RNH1P13489 461 aaKnown RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 PTGS2P35354 604 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 AHRP35869 848 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 ITGA8P53708 1063 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 IL2P60568 153 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 CSHL1Q14406 222 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 PHKG1Q16816 387 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 ZNF468Q5VIY5 522 aaPredicted RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 PAQR3Q6TCH7 311 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 SPNS3Q6ZMD2 512 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 C3P1Q6ZMU1 363 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 MEX3BQ6ZN04 569 aaKnown RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.37
TROAP-211ENST00000549891 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 GPATCH11Q8N954 259 aa12.71□□□□□ -0.37
TROAP-211ENST00000549891 ACBD4Q8NC06 268 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms