RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 ISL2Q96A47 359 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 PTCD3Q96EY7 689 aaKnown RBP8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 SCYL1Q96KG9 808 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 EFCAB11Q9BUY7 163 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 SLC6A16Q9GZN6 736 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 ZNF160Q9HCG1 818 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 MKL2Q9ULH7 1088 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 ANGPTL3Q9Y5C1 460 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 SLC22A7Q9Y694 548 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
TMEM106C-210ENST00000548965 SHANK1Q9Y566 2161 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 A0A0G2JN53 185 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 C4orf51C9J302 202 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 GALR3O60755 368 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 PRAMEF4O60810 478 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 H2AFYO75367 372 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 CDC123O75794 336 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 BMP10O95393 424 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 ALPPP05187 535 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 UQCRHP07919 91 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 C8orf89P0DMQ9 161 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 COX6A1P12074 109 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 MTHFD2P13995 350 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 CD22P20273 847 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 GCAP28676 217 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TNFRSF8P28908 595 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 HNRNPH1P31943 449 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 ALDH18A1P54886 795 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 IRF8Q02556 426 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 HYAL2Q12891 473 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 KLRB1Q12918 225 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 AIMP2Q13155 320 aaKnown RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 CHIT1Q13231 466 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 DOC2AQ14183 400 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 SLC29A2Q14542 456 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 NAA30Q147X3 362 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 MYBPC3Q14896 1274 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TSNAXIP1Q2TAA8 658 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 PAGE2BQ5JRK9 111 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 VWA5B1Q5TIE3 1220 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 IRAK1BP1Q5VVH5 260 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 PRAMEF9Q5VWM5 478 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 ATG14Q6ZNE5 492 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 LANCL3Q6ZV70 420 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 MYLK4Q86YV6 388 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 AFAP1L2Q8N4X5 818 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TEX9Q8N6V9 391 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TEX19Q8NA77 164 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TTLQ8NG68 377 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 UBLCP1Q8WVY7 318 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 NACC2Q96BF6 587 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 PEX11GQ96HA9 241 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 VPS50Q96JG6 964 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 GPR78Q96P69 363 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 CAPS2Q9BXY5 557 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TXLNGYQ9BZA5 131 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 TGIF2Q9GZN2 237 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 VN1R1Q9GZP7 353 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 EPN3Q9H201 632 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 EPB41L4BQ9H329 900 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 EHD1Q9H4M9 534 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 PSMC3IPQ9P2W1 217 aaPredicted RBP8.13□□□□□ -1.11
TMEM106C-210ENST00000548965 SETXQ7Z333 2677 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 NSG1A0A0A6YYJ2 146 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 OR2W5A6NFC9 320 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 URADA6NGE7 173 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 ANKDD1BA6NHY2 528 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 LRRC14BA6NHZ5 514 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 ERI3O43414 337 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 SUV39H1O43463 412 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 CLEC3AO75596 197 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 SIX3O95343 332 aaPredicted RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 HPP00738 406 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 SERPINA6P08185 405 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 SNRPAP09012 282 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 PCNAP12004 261 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 EPB42P16452 691 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 GSTM2P28161 218 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 ARL1P40616 181 aaPredicted RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 CASRP41180 1078 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 STXBP1P61764 594 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 TLE1Q04724 770 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 NADK2Q4G0N4 442 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 NIPAL1Q6NVV3 410 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 GOLGA7Q7Z5G4 137 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 PTGR2Q8N8N7 351 aaPredicted RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 EIF1ADQ8N9N8 165 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 UTP15Q8TED0 518 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 CREB3L4Q8TEY5 395 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 METTL21AQ8WXB1 218 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 TBC1D20Q96BZ9 403 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
TMEM106C-210ENST00000548965 WDR34Q96EX3 536 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms